Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CPS1P31327 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.19□□□□□ -2.06
CPS1P31327 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.19□□□□□ -2.06
CPS1P31327 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.19□□□□□ -2.06
CPS1P31327 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CPS1P31327 SNX5P1-201ENST00000505757 1041 ntBASIC2.19□□□□□ -2.06
CPS1P31327 RNU2-58P-201ENST00000516403 183 ntBASIC2.19□□□□□ -2.06
CPS1P31327 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.19□□□□□ -2.06
CPS1P31327 AC084851.1-201ENST00000529105 249 ntBASIC2.19□□□□□ -2.06
CPS1P31327 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CPS1P31327 HSPE1P11-201ENST00000339579 310 ntBASIC2.18□□□□□ -2.06
CPS1P31327 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.18□□□□□ -2.06
CPS1P31327 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.18□□□□□ -2.06
CPS1P31327 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CPS1P31327 HMGB3P21-201ENST00000452483 547 ntBASIC2.18□□□□□ -2.06
CPS1P31327 AC093767.1-201ENST00000504523 156 ntBASIC2.18□□□□□ -2.06
CPS1P31327 MTCO3P44-201ENST00000510977 541 ntBASIC2.18□□□□□ -2.06
CPS1P31327 AC239860.2-201ENST00000525886 270 ntBASIC2.18□□□□□ -2.06
CPS1P31327 AC005730.3-201ENST00000583067 366 ntBASIC2.18□□□□□ -2.06
CPS1P31327 AL592494.3-201ENST00000609485 464 ntBASIC2.18□□□□□ -2.06
CPS1P31327 AC091895.1-201ENST00000624494 256 ntBASIC2.18□□□□□ -2.06
CPS1P31327 XKRY2-202ENST00000623874 1581 ntBASIC2.18□□□□□ -2.06
CPS1P31327 XKRY-202ENST00000624960 1581 ntBASIC2.18□□□□□ -2.06
CPS1P31327 RNU1-109P-201ENST00000383960 147 ntBASIC2.17□□□□□ -2.06
CPS1P31327 AL023807.1-201ENST00000407932 359 ntBASIC2.17□□□□□ -2.06
CPS1P31327 MTND4LP13-201ENST00000425022 298 ntBASIC2.17□□□□□ -2.06
CPS1P31327 AC009965.2-201ENST00000425328 970 ntBASIC2.17□□□□□ -2.06
CPS1P31327 MTCYBP45-201ENST00000435243 565 ntBASIC2.17□□□□□ -2.06
CPS1P31327 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.17□□□□□ -2.06
CPS1P31327 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.17□□□□□ -2.06
CPS1P31327 AC012181.1-201ENST00000479895 423 ntBASIC2.17□□□□□ -2.06
CPS1P31327 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.17□□□□□ -2.06
CPS1P31327 OR4K8P-201ENST00000578842 1048 ntBASIC2.17□□□□□ -2.06
CPS1P31327 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CPS1P31327 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CPS1P31327 SUMO2P12-201ENST00000405924 140 ntBASIC2.17□□□□□ -2.06
CPS1P31327 MTCO1P43-201ENST00000431831 488 ntBASIC2.17□□□□□ -2.06
CPS1P31327 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CPS1P31327 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CPS1P31327 AC012170.1-201ENST00000495139 359 ntBASIC2.17□□□□□ -2.06
CPS1P31327 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.17□□□□□ -2.06
CPS1P31327 ICE2P2-201ENST00000483823 2787 ntBASIC2.16□□□□□ -2.06
CPS1P31327 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
CPS1P31327 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
CPS1P31327 AL365400.1-201ENST00000431854 640 ntBASIC2.16□□□□□ -2.06
CPS1P31327 RPS29P1-201ENST00000465274 159 ntBASIC2.16□□□□□ -2.06
CPS1P31327 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.16□□□□□ -2.06
CPS1P31327 RN7SKP49-201ENST00000516675 260 ntBASIC2.16□□□□□ -2.06
CPS1P31327 AC007115.1-201ENST00000546853 234 ntBASIC2.16□□□□□ -2.06
CPS1P31327 AL163153.1-201ENST00000554223 283 ntBASIC2.16□□□□□ -2.06
CPS1P31327 ACTR3BP3-201ENST00000565577 979 ntBASIC2.16□□□□□ -2.06
CPS1P31327 AC010735.1-201ENST00000567305 1026 ntBASIC2.16□□□□□ -2.06
CPS1P31327 AC116447.1-201ENST00000613153 453 ntBASIC2.16□□□□□ -2.06
CPS1P31327 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.16□□□□□ -2.06
CPS1P31327 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
CPS1P31327 RNA5SP393-201ENST00000363423 117 ntBASIC2.15□□□□□ -2.07
CPS1P31327 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CPS1P31327 DNAJC19P6-201ENST00000401853 280 ntBASIC2.15□□□□□ -2.07
CPS1P31327 AP000567.1-201ENST00000406413 156 ntBASIC2.15□□□□□ -2.07
CPS1P31327 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.15□□□□□ -2.07
CPS1P31327 MTCYBP7-201ENST00000419540 1134 ntBASIC2.15□□□□□ -2.07
CPS1P31327 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.15□□□□□ -2.07
CPS1P31327 RNA5SP82-201ENST00000516707 92 ntBASIC2.15□□□□□ -2.07
CPS1P31327 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.15□□□□□ -2.07
CPS1P31327 RPL21P5-201ENST00000554662 472 ntBASIC2.15□□□□□ -2.07
CPS1P31327 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.15□□□□□ -2.07
CPS1P31327 AC097468.3-201ENST00000607956 456 ntBASIC2.15□□□□□ -2.07
CPS1P31327 AC025016.1-201ENST00000616746 682 ntBASIC2.15□□□□□ -2.07
CPS1P31327 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.15□□□□□ -2.07
CPS1P31327 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.15□□□□□ -2.07
CPS1P31327 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.15□□□□□ -2.07
CPS1P31327 MTND5P12-201ENST00000502851 1449 ntBASIC2.15□□□□□ -2.07
CPS1P31327 CDC27P3-201ENST00000635418 1910 ntBASIC2.14□□□□□ -2.07
CPS1P31327 RNA5SP295-201ENST00000362655 121 ntBASIC2.14□□□□□ -2.07
CPS1P31327 Y_RNA.178-201ENST00000363832 102 ntBASIC2.14□□□□□ -2.07
CPS1P31327 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.14□□□□□ -2.07
CPS1P31327 RPS6P15-201ENST00000431996 751 ntBASIC2.14□□□□□ -2.07
CPS1P31327 CALM1P1-201ENST00000442082 433 ntBASIC2.14□□□□□ -2.07
CPS1P31327 RPS15AP1-201ENST00000457423 391 ntBASIC2.14□□□□□ -2.07
CPS1P31327 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.14□□□□□ -2.07
CPS1P31327 RPS29P20-201ENST00000489592 171 ntBASIC2.14□□□□□ -2.07
CPS1P31327 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.14□□□□□ -2.07
CPS1P31327 AC008121.3-201ENST00000618726 433 ntBASIC2.14□□□□□ -2.07
CPS1P31327 MIR6767-201ENST00000637302 66 ntBASIC2.14□□□□□ -2.07
CPS1P31327 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CPS1P31327 AC131280.1-202ENST00000624067 4211 ntBASIC2.14□□□□□ -2.07
CPS1P31327 AP002345.1-201ENST00000456493 928 ntBASIC2.13□□□□□ -2.07
CPS1P31327 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.13□□□□□ -2.07
CPS1P31327 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.13□□□□□ -2.07
CPS1P31327 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC2.13□□□□□ -2.07
CPS1P31327 AC024614.2-201ENST00000577584 372 ntBASIC2.13□□□□□ -2.07
CPS1P31327 VN1R84P-201ENST00000593697 235 ntBASIC2.13□□□□□ -2.07
CPS1P31327 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.13□□□□□ -2.07
CPS1P31327 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CPS1P31327 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
CPS1P31327 MIR144-201ENST00000384886 86 ntBASIC2.12□□□□□ -2.07
CPS1P31327 SNRPEP2-201ENST00000397592 279 ntBASIC2.12□□□□□ -2.07
CPS1P31327 AC073264.1-201ENST00000411508 416 ntBASIC2.12□□□□□ -2.07
CPS1P31327 HMGN2P19-201ENST00000425149 265 ntBASIC2.12□□□□□ -2.07
CPS1P31327 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms