Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 ELOCP31-201ENST00000540463 467 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC12P31275 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.54□□□□□ -1.68
HOXC12P31275 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC12P31275 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC12P31275 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC12P31275 MIR5690-201ENST00000583739 73 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.54□□□□□ -1.68
HOXC12P31275 AC008814.1-201ENST00000603797 406 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.54□□□□□ -1.68
HOXC12P31275 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AC093799.2-201ENST00000610062 578 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AC040896.1-201ENST00000613819 479 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AL138726.1-201ENST00000614873 333 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 AL158196.1-201ENST00000616786 434 ntBASIC4.54□□□□□ -1.68
HOXC12P31275 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
HOXC12P31275 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HOXC12P31275 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HOXC12P31275 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HOXC12P31275 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC12P31275 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HOXC12P31275 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 Y_RNA.187-201ENST00000363918 113 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 SNORA62-201ENST00000365493 153 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC12P31275 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC12P31275 GPS2P1-201ENST00000411761 986 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 VDAC1P9-201ENST00000412766 841 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 RPLP0P7-201ENST00000416050 667 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 MTATP6P4-201ENST00000427725 675 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AC079780.1-201ENST00000428259 207 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 C4BPAP2-201ENST00000428434 478 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AL669831.1-202ENST00000428504 417 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.53□□□□□ -1.68
HOXC12P31275 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.53□□□□□ -1.68
HOXC12P31275 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.53□□□□□ -1.68
HOXC12P31275 RPL26P6-201ENST00000440913 438 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 RPL32P28-201ENST00000443577 397 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 MRPS31P2-201ENST00000451581 518 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 snoU13.20-201ENST00000459180 104 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AC130509.1-201ENST00000464158 433 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AP000926.1-201ENST00000479573 241 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AC090096.1-201ENST00000489168 390 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 MRPS33P2-201ENST00000507850 322 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 AC093303.1-201ENST00000514549 295 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC12P31275 IMMP1LP2-201ENST00000552954 492 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC12P31275 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC12P31275 MIR5692C1-201ENST00000585309 91 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AC006504.6-201ENST00000590142 199 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC12P31275 BDH2P1-201ENST00000602288 736 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AC020910.3-201ENST00000603701 874 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 SNRPGP17-201ENST00000603780 214 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AC008745.1-201ENST00000604064 271 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC12P31275 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.53□□□□□ -1.68
HOXC12P31275 AC073869.10-201ENST00000642016 354 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 AC006206.1-201ENST00000544842 3387 ntBASIC4.53□□□□□ -1.68
HOXC12P31275 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC12P31275 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HOXC12P31275 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.53□□□□□ -1.68
HOXC12P31275 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HOXC12P31275 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC12P31275 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HOXC12P31275 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC12P31275 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC12P31275 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
HOXC12P31275 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC12P31275 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
HOXC12P31275 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HOXC12P31275 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC12P31275 SNURFL-201ENST00000309296 343 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 RNA5SP235-201ENST00000365411 114 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 RNU6-629P-201ENST00000384061 103 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 Y_RNA.482-201ENST00000384377 111 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 MIR1182-201ENST00000408363 97 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 RPS12P24-201ENST00000412619 387 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 COX6B1P1-201ENST00000415962 213 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 BX842559.1-201ENST00000419615 532 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 PDSS1P1-201ENST00000422953 1114 ntBASIC4.52□□□□□ -1.69
HOXC12P31275 AL160275.3-201ENST00000423876 471 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms