Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.62□□□□□ -1.83
HOXC8P31273 AC106038.2-201ENST00000520706 568 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC8P31273 HIGD1AP10-201ENST00000527837 282 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.62□□□□□ -1.83
HOXC8P31273 MIR5047-201ENST00000579212 100 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC8P31273 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXC8P31273 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC8P31273 BBIP1P1-201ENST00000602999 279 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 AL022099.1-201ENST00000604551 712 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 AC004853.1-201ENST00000604902 698 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 AC138932.5-201ENST00000617759 563 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 SNORD39.4-201ENST00000620099 78 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.62□□□□□ -1.83
HOXC8P31273 AC244205.2-202ENST00000635781 342 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 AC099063.3-201ENST00000642066 185 ntBASIC3.62□□□□□ -1.83
HOXC8P31273 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HOXC8P31273 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC8P31273 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC8P31273 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
HOXC8P31273 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC8P31273 CEP170P1-201ENST00000502249 4587 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC8P31273 AC017071.1-201ENST00000564407 2204 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 GNG5P1-201ENST00000255500 204 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 RNU6-1155P-201ENST00000363554 107 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC8P31273 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC8P31273 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC8P31273 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC8P31273 MTCO1P39-201ENST00000426148 480 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 MTCO3P5-201ENST00000433620 714 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC8P31273 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC8P31273 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC8P31273 MTND1P30-201ENST00000441241 901 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC8P31273 ELOCP23-201ENST00000452014 332 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC234775.1-201ENST00000454247 670 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 RNU7-136P-201ENST00000458819 69 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 RN7SL863P-201ENST00000462370 296 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC021205.2-201ENST00000480069 347 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC8P31273 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC8P31273 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC8P31273 FCF1P3-201ENST00000496394 590 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC091965.2-201ENST00000512324 613 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC006499.2-201ENST00000513470 337 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC8P31273 Y_RNA.695-201ENST00000516715 107 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC8P31273 AC060788.1-201ENST00000521318 469 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 DEFB131D-201ENST00000526803 184 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC8P31273 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC8P31273 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.61□□□□□ -1.83
HOXC8P31273 AL391156.1-201ENST00000554965 554 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC8P31273 MIR4738-201ENST00000579134 87 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC8P31273 RSL24D1P11-201ENST00000591045 491 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC8P31273 AC119751.7-201ENST00000600494 245 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 U73023.1-201ENST00000603134 700 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 MTCYBP22-201ENST00000603788 447 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC064872.1-201ENST00000604823 1072 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AC024560.3-201ENST00000608482 349 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AL357080.1-201ENST00000617394 239 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AL596245.1-201ENST00000618994 362 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 AL356266.1-201ENST00000623311 483 ntBASIC3.61□□□□□ -1.83
HOXC8P31273 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HOXC8P31273 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC8P31273 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
HOXC8P31273 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC8P31273 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC8P31273 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC8P31273 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXC8P31273 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC8P31273 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC8P31273 RPL21P132-201ENST00000331267 462 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 AL672167.1-206ENST00000356293 943 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 RNU6-623P-201ENST00000363143 105 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 Y_RNA.302-201ENST00000364997 102 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
HOXC8P31273 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HOXC8P31273 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.6□□□□□ -1.83
HOXC8P31273 AC007899.1-201ENST00000412776 775 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 AC007390.1-201ENST00000415722 356 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 CCDC58P2-201ENST00000417131 366 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 MED14P1-201ENST00000430517 648 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 RPL23AP69-201ENST00000431134 458 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC8P31273 SNRPEP7-201ENST00000438350 220 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.6□□□□□ -1.83
HOXC8P31273 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC8P31273 AL353691.1-201ENST00000451332 387 ntBASIC3.6□□□□□ -1.83
HOXC8P31273 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.6□□□□□ -1.83
HOXC8P31273 AC010424.1-201ENST00000506336 297 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms