Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
CLIP1P30622 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.32□□□□□ -2.04
CLIP1P30622 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLIP1P30622 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.31□□□□□ -2.04
CLIP1P30622 PABPC1P7-201ENST00000413177 1513 ntBASIC2.31□□□□□ -2.04
CLIP1P30622 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CLIP1P30622 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CLIP1P30622 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.31□□□□□ -2.04
CLIP1P30622 AC022022.1-201ENST00000430304 178 ntBASIC2.31□□□□□ -2.04
CLIP1P30622 AC090774.1-201ENST00000435925 246 ntBASIC2.31□□□□□ -2.04
CLIP1P30622 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.31□□□□□ -2.04
CLIP1P30622 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.31□□□□□ -2.04
CLIP1P30622 AC009901.1-201ENST00000506703 541 ntBASIC2.31□□□□□ -2.04
CLIP1P30622 AC006329.2-201ENST00000611491 394 ntBASIC2.31□□□□□ -2.04
CLIP1P30622 AL157834.3-201ENST00000615543 103 ntBASIC2.31□□□□□ -2.04
CLIP1P30622 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
CLIP1P30622 MIR1304-201ENST00000408243 91 ntBASIC2.3□□□□□ -2.04
CLIP1P30622 USP9YP6-201ENST00000413550 854 ntBASIC2.3□□□□□ -2.04
CLIP1P30622 AL512661.1-201ENST00000434586 1253 ntBASIC2.3□□□□□ -2.04
CLIP1P30622 USP9YP34-201ENST00000453983 808 ntBASIC2.3□□□□□ -2.04
CLIP1P30622 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.3□□□□□ -2.04
CLIP1P30622 Y_RNA.670-201ENST00000516255 105 ntBASIC2.3□□□□□ -2.04
CLIP1P30622 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC2.3□□□□□ -2.04
CLIP1P30622 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.3□□□□□ -2.04
CLIP1P30622 AC139103.1-201ENST00000534696 1030 ntBASIC2.3□□□□□ -2.04
CLIP1P30622 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.3□□□□□ -2.04
CLIP1P30622 AL592494.3-201ENST00000609485 464 ntBASIC2.3□□□□□ -2.04
CLIP1P30622 AC233981.2-201ENST00000611524 1614 ntBASIC2.3□□□□□ -2.04
CLIP1P30622 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLIP1P30622 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.29□□□□□ -2.04
CLIP1P30622 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLIP1P30622 RNU6-356P-201ENST00000384140 107 ntBASIC2.29□□□□□ -2.04
CLIP1P30622 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.29□□□□□ -2.04
CLIP1P30622 HMGB3P3-201ENST00000510526 400 ntBASIC2.29□□□□□ -2.04
CLIP1P30622 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLIP1P30622 SUB1P1-201ENST00000524415 382 ntBASIC2.29□□□□□ -2.04
CLIP1P30622 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CLIP1P30622 MIR6840-201ENST00000611937 71 ntBASIC2.29□□□□□ -2.04
CLIP1P30622 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CLIP1P30622 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
CLIP1P30622 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.29□□□□□ -2.04
CLIP1P30622 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CLIP1P30622 RNU2-25P-201ENST00000411041 191 ntBASIC2.28□□□□□ -2.04
CLIP1P30622 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CLIP1P30622 AC087808.1-201ENST00000520501 361 ntBASIC2.28□□□□□ -2.04
CLIP1P30622 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.28□□□□□ -2.04
CLIP1P30622 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.28□□□□□ -2.04
CLIP1P30622 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.28□□□□□ -2.04
CLIP1P30622 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.27□□□□□ -2.05
CLIP1P30622 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.27□□□□□ -2.05
CLIP1P30622 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.27□□□□□ -2.05
CLIP1P30622 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.27□□□□□ -2.05
CLIP1P30622 MIR3122-201ENST00000577243 73 ntBASIC2.27□□□□□ -2.05
CLIP1P30622 AC067838.1-201ENST00000606064 577 ntBASIC2.27□□□□□ -2.05
CLIP1P30622 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.27□□□□□ -2.05
CLIP1P30622 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CLIP1P30622 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CLIP1P30622 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CLIP1P30622 RNU6-1027P-201ENST00000383998 107 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 RPL23AP29-201ENST00000397284 453 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 FO393414.1-201ENST00000428697 1184 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.26□□□□□ -2.05
CLIP1P30622 RNU1-123P-201ENST00000458950 160 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 RNU1-104P-201ENST00000517280 175 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.26□□□□□ -2.05
CLIP1P30622 MIR3690-201ENST00000580266 75 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 AC010928.2-201ENST00000588017 287 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 RNA5SP108-201ENST00000605921 117 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 MIR6504-201ENST00000613520 61 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.26□□□□□ -2.05
CLIP1P30622 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CLIP1P30622 AL353770.2-201ENST00000620024 78 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 AC116618.1-201ENST00000634617 774 ntBASIC2.26□□□□□ -2.05
CLIP1P30622 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
CLIP1P30622 CD24P4-201ENST00000382840 243 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 RNY1P14-201ENST00000384426 108 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 AC092447.6-201ENST00000414578 210 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 RPL7P37-201ENST00000425095 738 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 ELOCP6-201ENST00000429066 328 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 MTCO3P21-201ENST00000430791 643 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 GTF2IP7-202ENST00000436677 309 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 MOB1AP2-201ENST00000446060 614 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 ELOCP12-201ENST00000458706 328 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 AC108734.3-201ENST00000481241 1165 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.25□□□□□ -2.05
CLIP1P30622 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.25□□□□□ -2.05
CLIP1P30622 WISP1-OT1-201ENST00000602893 642 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.25□□□□□ -2.05
CLIP1P30622 AL445183.3-201ENST00000414168 502 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.25□□□□□ -2.05
CLIP1P30622 RPL21P103-201ENST00000479921 488 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 RPL23AP41-201ENST00000484754 458 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.25□□□□□ -2.05
CLIP1P30622 AP002748.2-201ENST00000528671 348 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.25□□□□□ -2.05
CLIP1P30622 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.25□□□□□ -2.05
CLIP1P30622 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.25□□□□□ -2.05
CLIP1P30622 SNORA4-201ENST00000584302 138 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 AL161734.1-201ENST00000609720 557 ntBASIC2.25□□□□□ -2.05
CLIP1P30622 AC098657.3-201ENST00000620434 263 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms