Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.61□□□□□ -1.51
RXRBP28702 AC005014.2-201ENST00000607795 599 ntBASIC5.61□□□□□ -1.51
RXRBP28702 AL450472.3-201ENST00000615578 367 ntBASIC5.61□□□□□ -1.51
RXRBP28702 uc_338.9-201ENST00000617424 182 ntBASIC5.61□□□□□ -1.51
RXRBP28702 FP236240.3-201ENST00000623061 327 ntBASIC5.61□□□□□ -1.51
RXRBP28702 CR381572.1-201ENST00000625098 102 ntBASIC5.61□□□□□ -1.51
RXRBP28702 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
RXRBP28702 AC010329.2-201ENST00000595195 2737 ntBASIC5.61□□□□□ -1.51
RXRBP28702 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RXRBP28702 AL606537.1-201ENST00000607258 2011 ntBASIC5.6□□□□□ -1.51
RXRBP28702 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RXRBP28702 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.6□□□□□ -1.51
RXRBP28702 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RXRBP28702 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RXRBP28702 RNU6-1026P-201ENST00000384465 108 ntBASIC5.6□□□□□ -1.51
RXRBP28702 RPL7P60-201ENST00000397636 735 ntBASIC5.6□□□□□ -1.51
RXRBP28702 RPS20P14-201ENST00000412545 360 ntBASIC5.6□□□□□ -1.51
RXRBP28702 AC092832.1-201ENST00000422934 400 ntBASIC5.6□□□□□ -1.51
RXRBP28702 HSPD1P21-201ENST00000436541 245 ntBASIC5.6□□□□□ -1.51
RXRBP28702 SUMO1P3-201ENST00000439961 304 ntBASIC5.6□□□□□ -1.51
RXRBP28702 AC079781.2-201ENST00000446424 169 ntBASIC5.6□□□□□ -1.51
RXRBP28702 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.6□□□□□ -1.51
RXRBP28702 RPL35AP15-201ENST00000468042 339 ntBASIC5.6□□□□□ -1.51
RXRBP28702 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RXRBP28702 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.6□□□□□ -1.51
RXRBP28702 Y_RNA.682-201ENST00000516457 100 ntBASIC5.6□□□□□ -1.51
RXRBP28702 RNU6-1088P-201ENST00000516850 104 ntBASIC5.6□□□□□ -1.51
RXRBP28702 AP000889.2-201ENST00000532684 490 ntBASIC5.6□□□□□ -1.51
RXRBP28702 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC5.6□□□□□ -1.51
RXRBP28702 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.6□□□□□ -1.51
RXRBP28702 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.6□□□□□ -1.51
RXRBP28702 AC008269.2-201ENST00000561915 1105 ntBASIC5.6□□□□□ -1.51
RXRBP28702 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC5.6□□□□□ -1.51
RXRBP28702 AL512605.2-201ENST00000592972 256 ntBASIC5.6□□□□□ -1.51
RXRBP28702 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.6□□□□□ -1.51
RXRBP28702 AC113194.1-201ENST00000606037 500 ntBASIC5.6□□□□□ -1.51
RXRBP28702 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC5.6□□□□□ -1.51
RXRBP28702 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.6□□□□□ -1.51
RXRBP28702 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
RXRBP28702 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.6□□□□□ -1.51
RXRBP28702 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RXRBP28702 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RXRBP28702 PRO1804-201ENST00000623780 2050 ntBASIC5.6□□□□□ -1.51
RXRBP28702 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.6□□□□□ -1.51
RXRBP28702 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RXRBP28702 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RXRBP28702 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RXRBP28702 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.6□□□□□ -1.51
RXRBP28702 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RXRBP28702 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RXRBP28702 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RXRBP28702 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RXRBP28702 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.59□□□□□ -1.51
RXRBP28702 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RXRBP28702 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RXRBP28702 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.59□□□□□ -1.51
RXRBP28702 AC092079.1-201ENST00000558620 1985 ntBASIC5.59□□□□□ -1.51
RXRBP28702 AC139769.1-204ENST00000472297 1931 ntBASIC5.59□□□□□ -1.51
RXRBP28702 Y_RNA.47-201ENST00000362697 108 ntBASIC5.59□□□□□ -1.51
RXRBP28702 Y_RNA.188-201ENST00000363952 111 ntBASIC5.59□□□□□ -1.51
RXRBP28702 RNU6-853P-201ENST00000364306 107 ntBASIC5.59□□□□□ -1.51
RXRBP28702 RNA5SP267-201ENST00000364893 126 ntBASIC5.59□□□□□ -1.51
RXRBP28702 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RXRBP28702 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RXRBP28702 U3.26-201ENST00000391236 204 ntBASIC5.59□□□□□ -1.51
RXRBP28702 MIR548F5-201ENST00000408421 86 ntBASIC5.59□□□□□ -1.51
RXRBP28702 RNU6-370P-201ENST00000411008 104 ntBASIC5.59□□□□□ -1.51
RXRBP28702 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.59□□□□□ -1.51
RXRBP28702 AP000936.3-201ENST00000438127 255 ntBASIC5.59□□□□□ -1.51
RXRBP28702 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.59□□□□□ -1.51
RXRBP28702 CYCSP35-201ENST00000451978 304 ntBASIC5.59□□□□□ -1.51
RXRBP28702 BTF3P15-201ENST00000455606 336 ntBASIC5.59□□□□□ -1.51
RXRBP28702 MTCO3P10-201ENST00000455912 772 ntBASIC5.59□□□□□ -1.51
RXRBP28702 RPS20P32-201ENST00000456044 356 ntBASIC5.59□□□□□ -1.51
RXRBP28702 RPL21P99-201ENST00000480369 423 ntBASIC5.59□□□□□ -1.51
RXRBP28702 RN7SL809P-201ENST00000482040 297 ntBASIC5.59□□□□□ -1.51
RXRBP28702 AP001025.2-201ENST00000490908 477 ntBASIC5.59□□□□□ -1.51
RXRBP28702 AC034222.1-201ENST00000494052 532 ntBASIC5.59□□□□□ -1.51
RXRBP28702 RN7SL323P-201ENST00000494712 295 ntBASIC5.59□□□□□ -1.51
RXRBP28702 AC090453.1-201ENST00000495560 436 ntBASIC5.59□□□□□ -1.51
RXRBP28702 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RXRBP28702 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.59□□□□□ -1.51
RXRBP28702 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.59□□□□□ -1.51
RXRBP28702 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.59□□□□□ -1.51
RXRBP28702 RNU6-410P-201ENST00000517006 107 ntBASIC5.59□□□□□ -1.51
RXRBP28702 MYL12AP1-201ENST00000518490 515 ntBASIC5.59□□□□□ -1.51
RXRBP28702 RPL23AP53-201ENST00000521854 457 ntBASIC5.59□□□□□ -1.51
RXRBP28702 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.59□□□□□ -1.51
RXRBP28702 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.59□□□□□ -1.51
RXRBP28702 MIR3922-201ENST00000585192 84 ntBASIC5.59□□□□□ -1.51
RXRBP28702 BBIP1P1-201ENST00000602999 279 ntBASIC5.59□□□□□ -1.51
RXRBP28702 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.59□□□□□ -1.51
RXRBP28702 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.59□□□□□ -1.51
RXRBP28702 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RXRBP28702 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.59□□□□□ -1.51
RXRBP28702 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
RXRBP28702 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
RXRBP28702 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
RXRBP28702 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.59□□□□□ -1.52
RXRBP28702 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms