Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF4P23510 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF4P23510 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF4P23510 AL512310.1-201ENST00000548639 172 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF4P23510 RPL21P7-201ENST00000557463 483 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AC067959.1-201ENST00000604334 379 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AP001330.5-201ENST00000607176 411 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFSF4P23510 AF250324.2-201ENST00000608299 610 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AC068792.1-201ENST00000621354 417 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AC019278.1-201ENST00000623516 479 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 AL157786.1-207ENST00000627771 695 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFSF4P23510 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFSF4P23510 RAD17P1-201ENST00000418130 2042 ntBASIC3.81□□□□□ -1.8
TNFSF4P23510 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
TNFSF4P23510 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF4P23510 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.81□□□□□ -1.8
TNFSF4P23510 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.81□□□□□ -1.8
TNFSF4P23510 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF4P23510 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TNFSF4P23510 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF4P23510 UBE2L2-201ENST00000254302 429 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 RNU1-108P-201ENST00000362556 161 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 RNU6-61P-201ENST00000365528 109 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 RNU1-63P-201ENST00000383902 164 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 CALM2P3-201ENST00000400429 449 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 RPL7AP25-201ENST00000423357 805 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF4P23510 AL512844.2-201ENST00000433990 593 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFSF4P23510 MTND1P4-201ENST00000435196 415 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF4P23510 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFSF4P23510 SSXP4-201ENST00000451349 245 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFSF4P23510 FABP5P13-201ENST00000452144 328 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AC093899.1-201ENST00000457984 376 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 RNU6-420P-201ENST00000458780 107 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AC079804.1-201ENST00000461922 436 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 RPL21P126-201ENST00000470049 478 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 RN7SL481P-201ENST00000477764 299 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 RPL39P36-201ENST00000490784 156 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AC019235.1-201ENST00000503847 207 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFSF4P23510 AC009646.1-201ENST00000510455 318 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 APOOP4-201ENST00000513530 597 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 IGLVIV-65-201ENST00000517313 360 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFSF4P23510 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF4P23510 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFSF4P23510 ATP5J2P6-201ENST00000565203 266 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 MIR4715-201ENST00000584117 79 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFSF4P23510 AC098826.3-201ENST00000603823 466 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AC012409.3-201ENST00000611343 981 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AP001486.3-201ENST00000615334 372 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 AL359547.2-201ENST00000615810 418 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF4P23510 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF4P23510 uc_338.11-201ENST00000619132 160 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF4P23510 U6.114-201ENST00000636407 96 ntBASIC3.8□□□□□ -1.8
TNFSF4P23510 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
TNFSF4P23510 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF4P23510 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF4P23510 API5P2-201ENST00000397055 1498 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFSF4P23510 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFSF4P23510 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFSF4P23510 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TNFSF4P23510 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
TNFSF4P23510 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
TNFSF4P23510 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFSF4P23510 OR4G2P-201ENST00000328113 903 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFSF4P23510 RNA5SP447-201ENST00000363749 119 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 SNORA62.1-201ENST00000364287 154 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 RNU6-1322P-201ENST00000364309 107 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 Y_RNA.245-201ENST00000364493 95 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
TNFSF4P23510 MIR325-201ENST00000385260 98 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 SOD2P1-201ENST00000396543 562 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 AL590704.1-201ENST00000402856 794 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 AL139397.2-201ENST00000404529 772 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 HSPE1P8-201ENST00000406997 288 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFSF4P23510 RPS12P24-201ENST00000412619 387 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 AC080125.1-201ENST00000414888 684 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 AL353193.1-201ENST00000421444 268 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.79□□□□□ -1.8
TNFSF4P23510 AC092047.1-201ENST00000424997 240 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 CALM2P2-201ENST00000428512 440 ntBASIC3.79□□□□□ -1.8
TNFSF4P23510 RPL23AP69-201ENST00000431134 458 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms