Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 HMGN2P30-201ENST00000423237 256 ntBASIC2.42□□□□□ -2.02
USF1P22415 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.42□□□□□ -2.02
USF1P22415 THAP5P1-201ENST00000439089 262 ntBASIC2.42□□□□□ -2.02
USF1P22415 MTND2P20-201ENST00000440805 661 ntBASIC2.42□□□□□ -2.02
USF1P22415 RPL26P6-201ENST00000440913 438 ntBASIC2.42□□□□□ -2.02
USF1P22415 HMGN1P5-201ENST00000448591 263 ntBASIC2.42□□□□□ -2.02
USF1P22415 AP004217.1-201ENST00000480579 346 ntBASIC2.42□□□□□ -2.02
USF1P22415 RN7SL432P-201ENST00000484057 298 ntBASIC2.42□□□□□ -2.02
USF1P22415 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.42□□□□□ -2.02
USF1P22415 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.42□□□□□ -2.02
USF1P22415 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.42□□□□□ -2.02
USF1P22415 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.42□□□□□ -2.02
USF1P22415 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.42□□□□□ -2.02
USF1P22415 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.42□□□□□ -2.02
USF1P22415 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.42□□□□□ -2.02
USF1P22415 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
USF1P22415 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
USF1P22415 HIGD1AP17-201ENST00000554576 276 ntBASIC2.42□□□□□ -2.02
USF1P22415 HMGB1P14-201ENST00000557424 591 ntBASIC2.42□□□□□ -2.02
USF1P22415 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.42□□□□□ -2.02
USF1P22415 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.42□□□□□ -2.02
USF1P22415 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.42□□□□□ -2.02
USF1P22415 MIR4435-1-201ENST00000582552 80 ntBASIC2.42□□□□□ -2.02
USF1P22415 AC068620.3-201ENST00000602749 560 ntBASIC2.42□□□□□ -2.02
USF1P22415 NRBF2P5-201ENST00000603087 788 ntBASIC2.42□□□□□ -2.02
USF1P22415 AC015871.2-201ENST00000603605 948 ntBASIC2.42□□□□□ -2.02
USF1P22415 AC069304.2-201ENST00000605154 435 ntBASIC2.42□□□□□ -2.02
USF1P22415 AL596245.1-201ENST00000618994 362 ntBASIC2.42□□□□□ -2.02
USF1P22415 Z99129.2-201ENST00000619967 314 ntBASIC2.42□□□□□ -2.02
USF1P22415 AC007318.2-201ENST00000620999 243 ntBASIC2.42□□□□□ -2.02
USF1P22415 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
USF1P22415 AP003476.1-201ENST00000623984 516 ntBASIC2.42□□□□□ -2.02
USF1P22415 AC126544.2-201ENST00000625174 749 ntBASIC2.42□□□□□ -2.02
USF1P22415 IGHVIII-44-202ENST00000636235 289 ntBASIC2.42□□□□□ -2.02
USF1P22415 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
USF1P22415 AL356473.1-201ENST00000406203 1408 ntBASIC2.42□□□□□ -2.02
USF1P22415 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.41□□□□□ -2.02
USF1P22415 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.41□□□□□ -2.02
USF1P22415 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
USF1P22415 AC099654.7-201ENST00000635788 2127 ntBASIC2.41□□□□□ -2.02
USF1P22415 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
USF1P22415 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USF1P22415 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.41□□□□□ -2.02
USF1P22415 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
USF1P22415 MIR196B-201ENST00000384852 84 ntBASIC2.41□□□□□ -2.02
USF1P22415 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
USF1P22415 RPS3AP24-201ENST00000407896 734 ntBASIC2.41□□□□□ -2.02
USF1P22415 RN7SKP284-201ENST00000411002 343 ntBASIC2.41□□□□□ -2.02
USF1P22415 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.41□□□□□ -2.02
USF1P22415 MTCO2P5-201ENST00000422621 426 ntBASIC2.41□□□□□ -2.02
USF1P22415 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.41□□□□□ -2.02
USF1P22415 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USF1P22415 RPL32P28-201ENST00000443577 397 ntBASIC2.41□□□□□ -2.02
USF1P22415 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.41□□□□□ -2.02
USF1P22415 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.41□□□□□ -2.02
USF1P22415 RPL23AP20-201ENST00000447965 421 ntBASIC2.41□□□□□ -2.02
USF1P22415 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.41□□□□□ -2.02
USF1P22415 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.41□□□□□ -2.02
USF1P22415 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.41□□□□□ -2.02
USF1P22415 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
USF1P22415 AC114322.1-201ENST00000506771 926 ntBASIC2.41□□□□□ -2.02
USF1P22415 RNU6-1225P-201ENST00000516336 65 ntBASIC2.41□□□□□ -2.02
USF1P22415 RNU6-798P-201ENST00000516912 103 ntBASIC2.41□□□□□ -2.02
USF1P22415 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.41□□□□□ -2.02
USF1P22415 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.41□□□□□ -2.02
USF1P22415 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.41□□□□□ -2.02
USF1P22415 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.41□□□□□ -2.02
USF1P22415 ACTR3BP3-201ENST00000565577 979 ntBASIC2.41□□□□□ -2.02
USF1P22415 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.41□□□□□ -2.02
USF1P22415 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.41□□□□□ -2.02
USF1P22415 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.41□□□□□ -2.02
USF1P22415 AL133507.1-201ENST00000605269 557 ntBASIC2.41□□□□□ -2.02
USF1P22415 AC243773.3-201ENST00000613270 256 ntBASIC2.41□□□□□ -2.02
USF1P22415 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.41□□□□□ -2.02
USF1P22415 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
USF1P22415 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
USF1P22415 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
USF1P22415 AC012321.1-201ENST00000561622 1588 ntBASIC2.4□□□□□ -2.02
USF1P22415 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
USF1P22415 AC005539.1-201ENST00000443768 1479 ntBASIC2.4□□□□□ -2.02
USF1P22415 FO393413.1-201ENST00000402892 195 ntBASIC2.4□□□□□ -2.03
USF1P22415 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.4□□□□□ -2.03
USF1P22415 AC096533.1-201ENST00000411645 353 ntBASIC2.4□□□□□ -2.03
USF1P22415 AC069282.1-201ENST00000411911 526 ntBASIC2.4□□□□□ -2.03
USF1P22415 AL161449.1-201ENST00000414531 1199 ntBASIC2.4□□□□□ -2.03
USF1P22415 AL356320.2-201ENST00000417263 507 ntBASIC2.4□□□□□ -2.03
USF1P22415 MRPS36P1-201ENST00000421291 307 ntBASIC2.4□□□□□ -2.03
USF1P22415 LSM1P1-201ENST00000438629 273 ntBASIC2.4□□□□□ -2.03
USF1P22415 SDCBPP1-201ENST00000440192 890 ntBASIC2.4□□□□□ -2.03
USF1P22415 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.4□□□□□ -2.03
USF1P22415 NIPA2P5-201ENST00000452282 464 ntBASIC2.4□□□□□ -2.03
USF1P22415 AL109933.2-201ENST00000452651 260 ntBASIC2.4□□□□□ -2.03
USF1P22415 TRGVB-201ENST00000453257 471 ntBASIC2.4□□□□□ -2.03
USF1P22415 AC234775.1-201ENST00000454247 670 ntBASIC2.4□□□□□ -2.03
USF1P22415 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.4□□□□□ -2.03
USF1P22415 AC092798.1-201ENST00000458542 409 ntBASIC2.4□□□□□ -2.03
USF1P22415 AC008571.1-201ENST00000467232 300 ntBASIC2.4□□□□□ -2.03
USF1P22415 AC069528.1-202ENST00000482888 637 ntBASIC2.4□□□□□ -2.03
USF1P22415 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.4□□□□□ -2.03
USF1P22415 SEM1P1-201ENST00000506694 209 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms