Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.15□□□□□ -2.06
COL5A1P20908 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 RNU7-27P-201ENST00000459281 62 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC2.15□□□□□ -2.06
COL5A1P20908 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.15□□□□□ -2.06
COL5A1P20908 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.15□□□□□ -2.06
COL5A1P20908 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.15□□□□□ -2.06
COL5A1P20908 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.15□□□□□ -2.06
COL5A1P20908 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.15□□□□□ -2.06
COL5A1P20908 AC022790.1-201ENST00000522872 204 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AC104417.1-201ENST00000523974 751 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 MTCO3P15-201ENST00000526563 574 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AC008083.2-201ENST00000546707 476 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AL583856.2-201ENST00000606298 543 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AC010975.3-201ENST00000618727 978 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AC123767.1-202ENST00000620407 817 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 CYP3A51P-201ENST00000633513 256 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 AC132825.7-201ENST00000638744 335 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 BX649567.1-201ENST00000642071 1134 ntBASIC2.15□□□□□ -2.06
COL5A1P20908 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.07
COL5A1P20908 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.15□□□□□ -2.07
COL5A1P20908 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
COL5A1P20908 FAM35CP-201ENST00000554755 2470 ntBASIC2.15□□□□□ -2.07
COL5A1P20908 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COL5A1P20908 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.15□□□□□ -2.07
COL5A1P20908 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.15□□□□□ -2.07
COL5A1P20908 RNU6-98P-201ENST00000384173 107 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 SFR1P1-201ENST00000403720 688 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AL136310.1-201ENST00000404926 654 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AL139156.1-201ENST00000412785 841 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.14□□□□□ -2.07
COL5A1P20908 HMGB1P49-201ENST00000418882 569 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 PNRC2P1-201ENST00000423940 420 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC092648.1-201ENST00000425870 423 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.14□□□□□ -2.07
COL5A1P20908 CR769767.1-201ENST00000436337 346 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 NDUFA5P4-201ENST00000436704 385 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC244505.3-201ENST00000454598 187 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC093534.1-201ENST00000504977 132 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 SNX5P1-201ENST00000505757 1041 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.14□□□□□ -2.07
COL5A1P20908 AK6P1-201ENST00000540219 478 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.14□□□□□ -2.07
COL5A1P20908 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.14□□□□□ -2.07
COL5A1P20908 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.14□□□□□ -2.07
COL5A1P20908 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC024257.5-201ENST00000612739 531 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.14□□□□□ -2.07
COL5A1P20908 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL5A1P20908 AC004520.1-201ENST00000608362 1413 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
COL5A1P20908 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
COL5A1P20908 Y_RNA.540-201ENST00000384638 111 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AC119751.3-201ENST00000399720 670 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AL592310.1-201ENST00000414330 671 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 RPL22P18-201ENST00000417197 377 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AL356320.2-201ENST00000417263 507 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 MTND2P16-201ENST00000419987 799 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AL138785.1-201ENST00000425821 331 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 RAC1P8-201ENST00000427086 527 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 HMGB1P45-201ENST00000435986 653 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.14□□□□□ -2.07
COL5A1P20908 Z77249.1-201ENST00000444622 1175 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC073055.1-201ENST00000456901 1621 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL5A1P20908 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC010627.1-201ENST00000503819 1294 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 Y_RNA.670-201ENST00000516255 105 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 MTND2P38-201ENST00000522536 667 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 OR8K4P-201ENST00000534608 872 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 LRRC34P1-201ENST00000542742 915 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AC004486.1-201ENST00000546846 233 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.14□□□□□ -2.07
COL5A1P20908 MTND4P33-201ENST00000556706 766 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 MIR3912-201ENST00000577566 105 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.14□□□□□ -2.07
COL5A1P20908 ZNF849P-201ENST00000594711 1566 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.14□□□□□ -2.07
COL5A1P20908 PCNAP1-202ENST00000595299 752 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.14□□□□□ -2.07
COL5A1P20908 AC245036.5-201ENST00000596330 847 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AL355578.1-201ENST00000607405 1328 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AP000484.1-201ENST00000620067 1252 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
COL5A1P20908 AL160394.1-201ENST00000624765 724 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 AL121594.5-201ENST00000631724 573 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 MTND2P41-201ENST00000637599 773 ntBASIC2.14□□□□□ -2.07
COL5A1P20908 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL5A1P20908 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL5A1P20908 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL5A1P20908 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
COL5A1P20908 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121 ms