Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 FTLP8-201ENST00000446770 267 ntBASIC4.52□□□□□ -1.69
ATF4P18848 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 AC093166.4-201ENST00000457867 318 ntBASIC4.52□□□□□ -1.69
ATF4P18848 CYCSP34-201ENST00000458172 304 ntBASIC4.52□□□□□ -1.69
ATF4P18848 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 AC104164.2-201ENST00000496953 495 ntBASIC4.52□□□□□ -1.69
ATF4P18848 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 HMGB3P15-201ENST00000507326 574 ntBASIC4.52□□□□□ -1.69
ATF4P18848 AC116337.1-201ENST00000509680 687 ntBASIC4.52□□□□□ -1.69
ATF4P18848 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 RN7SKP13-201ENST00000515933 244 ntBASIC4.52□□□□□ -1.69
ATF4P18848 RNU1-86P-201ENST00000516108 154 ntBASIC4.52□□□□□ -1.69
ATF4P18848 RNU1-107P-201ENST00000516617 154 ntBASIC4.52□□□□□ -1.69
ATF4P18848 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.52□□□□□ -1.69
ATF4P18848 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 ANP32BP3-201ENST00000559213 706 ntBASIC4.52□□□□□ -1.69
ATF4P18848 AC069061.3-201ENST00000582254 823 ntBASIC4.52□□□□□ -1.69
ATF4P18848 CYP2C61P-201ENST00000604072 290 ntBASIC4.52□□□□□ -1.69
ATF4P18848 AC080078.3-201ENST00000605407 463 ntBASIC4.52□□□□□ -1.69
ATF4P18848 SNX18P1Y-201ENST00000616231 511 ntBASIC4.52□□□□□ -1.69
ATF4P18848 PISRT1.1-201ENST00000616930 107 ntBASIC4.52□□□□□ -1.69
ATF4P18848 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 AC245014.3-201ENST00000618589 347 ntBASIC4.52□□□□□ -1.69
ATF4P18848 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
ATF4P18848 AC092435.4-201ENST00000623012 4159 ntBASIC4.52□□□□□ -1.69
ATF4P18848 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATF4P18848 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.52□□□□□ -1.69
ATF4P18848 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.52□□□□□ -1.69
ATF4P18848 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.51□□□□□ -1.69
ATF4P18848 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
ATF4P18848 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATF4P18848 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATF4P18848 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATF4P18848 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATF4P18848 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.51□□□□□ -1.69
ATF4P18848 RNU1-108P-201ENST00000362556 161 ntBASIC4.51□□□□□ -1.69
ATF4P18848 Y_RNA.146-201ENST00000363549 102 ntBASIC4.51□□□□□ -1.69
ATF4P18848 RNU6-1329P-201ENST00000365664 107 ntBASIC4.51□□□□□ -1.69
ATF4P18848 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATF4P18848 SNORA51.9-201ENST00000384295 124 ntBASIC4.51□□□□□ -1.69
ATF4P18848 MIR708-201ENST00000390708 88 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AL022722.2-201ENST00000402519 180 ntBASIC4.51□□□□□ -1.69
ATF4P18848 OR4K12P-201ENST00000406538 961 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.51□□□□□ -1.69
ATF4P18848 AC245054.2-201ENST00000415639 319 ntBASIC4.51□□□□□ -1.69
ATF4P18848 YPEL5P1-201ENST00000419731 367 ntBASIC4.51□□□□□ -1.69
ATF4P18848 MYL8P-204ENST00000431574 518 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.51□□□□□ -1.69
ATF4P18848 RPL7AP61-201ENST00000443410 636 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.51□□□□□ -1.69
ATF4P18848 AL583843.1-201ENST00000456070 346 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AC023194.2-201ENST00000465398 406 ntBASIC4.51□□□□□ -1.69
ATF4P18848 RN7SL447P-201ENST00000494711 245 ntBASIC4.51□□□□□ -1.69
ATF4P18848 RPS4XP20-201ENST00000505751 772 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AC025458.1-201ENST00000506046 166 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.51□□□□□ -1.69
ATF4P18848 SNORA31.19-201ENST00000517079 126 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AC009902.1-201ENST00000519351 183 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.51□□□□□ -1.69
ATF4P18848 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.51□□□□□ -1.69
ATF4P18848 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.51□□□□□ -1.69
ATF4P18848 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.51□□□□□ -1.69
ATF4P18848 AC000068.2-201ENST00000608816 460 ntBASIC4.51□□□□□ -1.69
ATF4P18848 AL110115.1-201ENST00000614396 364 ntBASIC4.51□□□□□ -1.69
ATF4P18848 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.51□□□□□ -1.69
ATF4P18848 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATF4P18848 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.51□□□□□ -1.69
ATF4P18848 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.51□□□□□ -1.69
ATF4P18848 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ATF4P18848 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
ATF4P18848 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ATF4P18848 RBMY1HP-201ENST00000382759 1389 ntBASIC4.51□□□□□ -1.69
ATF4P18848 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
ATF4P18848 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ATF4P18848 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.5□□□□□ -1.69
ATF4P18848 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
ATF4P18848 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ATF4P18848 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.5□□□□□ -1.69
ATF4P18848 CUL1P1-201ENST00000509510 2425 ntBASIC4.5□□□□□ -1.69
ATF4P18848 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATF4P18848 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ATF4P18848 SNORD62.1-201ENST00000362541 86 ntBASIC4.5□□□□□ -1.69
ATF4P18848 RNU6-95P-201ENST00000384697 107 ntBASIC4.5□□□□□ -1.69
ATF4P18848 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ATF4P18848 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
ATF4P18848 AC007738.1-201ENST00000413892 348 ntBASIC4.5□□□□□ -1.69
ATF4P18848 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms