Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.82□□□□□ -1.96
SDC1P18827 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SDC1P18827 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SDC1P18827 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SDC1P18827 AL672167.1-206ENST00000356293 943 ntBASIC2.82□□□□□ -1.96
SDC1P18827 MIR887-201ENST00000401258 79 ntBASIC2.82□□□□□ -1.96
SDC1P18827 MIR320C1-201ENST00000408566 88 ntBASIC2.82□□□□□ -1.96
SDC1P18827 RNU4-65P-201ENST00000410473 140 ntBASIC2.82□□□□□ -1.96
SDC1P18827 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.82□□□□□ -1.96
SDC1P18827 AL451074.5-201ENST00000415894 435 ntBASIC2.82□□□□□ -1.96
SDC1P18827 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.82□□□□□ -1.96
SDC1P18827 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
SDC1P18827 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.82□□□□□ -1.96
SDC1P18827 AL035407.1-201ENST00000429211 571 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.82□□□□□ -1.96
SDC1P18827 MTCYBP34-201ENST00000439552 670 ntBASIC2.82□□□□□ -1.96
SDC1P18827 RPL26P6-201ENST00000440913 438 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AL121871.1-201ENST00000443413 436 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AL606662.1-201ENST00000445763 553 ntBASIC2.82□□□□□ -1.96
SDC1P18827 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.82□□□□□ -1.96
SDC1P18827 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.82□□□□□ -1.96
SDC1P18827 FTH1P2-201ENST00000466086 412 ntBASIC2.82□□□□□ -1.96
SDC1P18827 RPS23P3-201ENST00000470993 430 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AP001025.2-201ENST00000490908 477 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AC006445.1-201ENST00000491925 405 ntBASIC2.82□□□□□ -1.96
SDC1P18827 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.82□□□□□ -1.96
SDC1P18827 LTV1P1-201ENST00000510683 1237 ntBASIC2.82□□□□□ -1.96
SDC1P18827 SNORA70.16-201ENST00000516390 95 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AC103783.1-201ENST00000520506 373 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AP003461.1-201ENST00000528866 78 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.82□□□□□ -1.96
SDC1P18827 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.82□□□□□ -1.96
SDC1P18827 AC125611.2-201ENST00000551907 647 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.82□□□□□ -1.96
SDC1P18827 AC034105.3-201ENST00000565294 442 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.82□□□□□ -1.96
SDC1P18827 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.82□□□□□ -1.96
SDC1P18827 AC008739.3-201ENST00000603262 127 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AL158211.4-201ENST00000606988 584 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AC087683.2-201ENST00000611384 326 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AC009159.2-201ENST00000617603 606 ntBASIC2.82□□□□□ -1.96
SDC1P18827 AL513185.3-201ENST00000433335 1300 ntBASIC2.82□□□□□ -1.96
SDC1P18827 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SDC1P18827 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
SDC1P18827 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
SDC1P18827 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SDC1P18827 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 RNA5SP88-201ENST00000365560 109 ntBASIC2.81□□□□□ -1.96
SDC1P18827 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDC1P18827 RNU6-114P-201ENST00000384704 105 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AL031121.1-201ENST00000406553 254 ntBASIC2.81□□□□□ -1.96
SDC1P18827 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.81□□□□□ -1.96
SDC1P18827 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDC1P18827 RN7SKP266-201ENST00000410232 287 ntBASIC2.81□□□□□ -1.96
SDC1P18827 RN7SKP220-201ENST00000410611 288 ntBASIC2.81□□□□□ -1.96
SDC1P18827 BMS1P22-201ENST00000414726 313 ntBASIC2.81□□□□□ -1.96
SDC1P18827 RPL21P32-201ENST00000419877 477 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC1P18827 AC010099.3-201ENST00000423896 409 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AL445669.1-201ENST00000426743 755 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC1P18827 AC090774.1-201ENST00000435925 246 ntBASIC2.81□□□□□ -1.96
SDC1P18827 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDC1P18827 RPS29P6-201ENST00000438196 145 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AL354941.1-201ENST00000438600 464 ntBASIC2.81□□□□□ -1.96
SDC1P18827 MTCYBP3-201ENST00000445588 1137 ntBASIC2.81□□□□□ -1.96
SDC1P18827 VN1R34P-201ENST00000447387 883 ntBASIC2.81□□□□□ -1.96
SDC1P18827 OR6C5P-201ENST00000452388 923 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 AC234775.1-201ENST00000454247 670 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC1P18827 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 MTCYBP35-201ENST00000503630 1137 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.81□□□□□ -1.96
SDC1P18827 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 AC008885.1-201ENST00000514930 301 ntBASIC2.81□□□□□ -1.96
SDC1P18827 RN7SKP272-201ENST00000516988 232 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC1P18827 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.81□□□□□ -1.96
SDC1P18827 AC007536.1-201ENST00000533382 349 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC1P18827 AC009094.1-201ENST00000564443 426 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC1P18827 MIR4444-1-201ENST00000581696 74 ntBASIC2.81□□□□□ -1.96
SDC1P18827 MIR4444-2-201ENST00000584390 74 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.81□□□□□ -1.96
SDC1P18827 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.81□□□□□ -1.96
SDC1P18827 MIR6130-201ENST00000619419 109 ntBASIC2.81□□□□□ -1.96
SDC1P18827 AP000676.4-201ENST00000624659 623 ntBASIC2.81□□□□□ -1.96
SDC1P18827 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.81□□□□□ -1.96
SDC1P18827 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.81□□□□□ -1.96
SDC1P18827 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SDC1P18827 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDC1P18827 ZNF807-201ENST00000328088 1707 ntBASIC2.81□□□□□ -1.96
SDC1P18827 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms