Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ERHP1-201ENST00000523006 310 ntBASIC2.41□□□□□ -2.02
HLA-DPB1P04440 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HLA-DPB1P04440 CYCSP39-201ENST00000565821 309 ntBASIC2.41□□□□□ -2.02
HLA-DPB1P04440 AL512347.1-201ENST00000566420 503 ntBASIC2.41□□□□□ -2.02
HLA-DPB1P04440 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.41□□□□□ -2.02
HLA-DPB1P04440 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.41□□□□□ -2.02
HLA-DPB1P04440 AC024153.1-201ENST00000603103 365 ntBASIC2.41□□□□□ -2.02
HLA-DPB1P04440 AC021749.1-201ENST00000604322 607 ntBASIC2.41□□□□□ -2.02
HLA-DPB1P04440 AC093732.2-201ENST00000607950 274 ntBASIC2.41□□□□□ -2.02
HLA-DPB1P04440 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HLA-DPB1P04440 AC079228.1-201ENST00000624774 1049 ntBASIC2.41□□□□□ -2.02
HLA-DPB1P04440 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.41□□□□□ -2.02
HLA-DPB1P04440 AC116618.1-201ENST00000634617 774 ntBASIC2.41□□□□□ -2.02
HLA-DPB1P04440 AC090897.3-201ENST00000636973 1157 ntBASIC2.41□□□□□ -2.02
HLA-DPB1P04440 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HLA-DPB1P04440 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HLA-DPB1P04440 ZNF29P-201ENST00000225587 168 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AL354719.1-201ENST00000406535 843 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 RNU6-1077P-201ENST00000410506 102 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 RNA5SP38-201ENST00000410750 119 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 TIMM9P2-201ENST00000419324 266 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 MTATP6P4-201ENST00000427725 675 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 THAP5P1-201ENST00000439089 262 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 RPL26P6-201ENST00000440913 438 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 MTCO2P25-201ENST00000447065 681 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AL009048.1-201ENST00000450437 298 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AC097493.1-201ENST00000463958 372 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 UBE2V1P12-201ENST00000503954 474 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AC119751.4-201ENST00000507498 357 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 CYCSP2-201ENST00000558168 301 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 MIR4509-3-201ENST00000578671 94 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 MIR4509-2-201ENST00000583920 94 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AP001269.3-201ENST00000588718 329 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AC013444.2-201ENST00000603317 787 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 MIR4509-1-201ENST00000618224 94 ntBASIC2.4□□□□□ -2.03
HLA-DPB1P04440 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
HLA-DPB1P04440 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 RNU6-28P-201ENST00000362378 107 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 Y_RNA.234-201ENST00000364409 97 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 RNU6-621P-201ENST00000364752 109 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AL096701.2-201ENST00000416920 238 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 HSPE1P1-201ENST00000421494 318 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 USP9YP36-201ENST00000424581 829 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 ATP5F1P1-201ENST00000433775 569 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 RPS12P2-201ENST00000439728 269 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AL135938.1-201ENST00000443141 297 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 HIGD1AP13-201ENST00000509878 289 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 MTATP6P9-201ENST00000515039 680 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 RNU6-150P-201ENST00000516237 95 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 RNU6-711P-201ENST00000517255 106 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 DEFB131D-201ENST00000526803 184 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AC123904.3-201ENST00000547218 814 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 SETP2-201ENST00000553886 926 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AP005205.1-201ENST00000563503 508 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AL133393.1-201ENST00000603277 287 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.39□□□□□ -2.03
HLA-DPB1P04440 TUG1_1.1-201ENST00000610654 145 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AC135507.2-201ENST00000612443 309 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AL590099.1-201ENST00000615276 138 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 AL450472.3-201ENST00000615578 367 ntBASIC2.39□□□□□ -2.03
HLA-DPB1P04440 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 204.4 ms