Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RFC5P1-201ENST00000454419 874 ntBASIC2.34□□□□□ -2.03
CD74P04233 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.34□□□□□ -2.03
CD74P04233 snoU109.3-201ENST00000459477 145 ntBASIC2.34□□□□□ -2.03
CD74P04233 AC104164.3-201ENST00000467363 1258 ntBASIC2.34□□□□□ -2.03
CD74P04233 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.34□□□□□ -2.03
CD74P04233 MTCYBP17-201ENST00000503579 789 ntBASIC2.34□□□□□ -2.03
CD74P04233 TMEM251P1-201ENST00000503717 318 ntBASIC2.34□□□□□ -2.03
CD74P04233 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.34□□□□□ -2.03
CD74P04233 HMGB1P28-201ENST00000507778 552 ntBASIC2.34□□□□□ -2.03
CD74P04233 AC117522.3-201ENST00000507974 584 ntBASIC2.34□□□□□ -2.03
CD74P04233 AC010625.1-201ENST00000511296 403 ntBASIC2.34□□□□□ -2.03
CD74P04233 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.34□□□□□ -2.03
CD74P04233 AL132657.2-201ENST00000564417 358 ntBASIC2.34□□□□□ -2.03
CD74P04233 MIR5680-201ENST00000577577 84 ntBASIC2.34□□□□□ -2.03
CD74P04233 MIR5004-201ENST00000579078 107 ntBASIC2.34□□□□□ -2.03
CD74P04233 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.34□□□□□ -2.03
CD74P04233 AC060766.3-201ENST00000591442 263 ntBASIC2.34□□□□□ -2.03
CD74P04233 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.34□□□□□ -2.03
CD74P04233 AL606834.2-201ENST00000602954 668 ntBASIC2.34□□□□□ -2.03
CD74P04233 AL137843.1-201ENST00000605078 385 ntBASIC2.34□□□□□ -2.03
CD74P04233 AL139022.2-201ENST00000606934 443 ntBASIC2.34□□□□□ -2.03
CD74P04233 AL391834.2-201ENST00000609982 546 ntBASIC2.34□□□□□ -2.03
CD74P04233 AL161629.2-201ENST00000615347 275 ntBASIC2.34□□□□□ -2.03
CD74P04233 CYCSP41-201ENST00000616920 296 ntBASIC2.34□□□□□ -2.03
CD74P04233 MIR1322-201ENST00000638013 71 ntBASIC2.34□□□□□ -2.03
CD74P04233 LINC02211-204ENST00000642024 1070 ntBASIC2.34□□□□□ -2.03
CD74P04233 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CD74P04233 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CD74P04233 AP000526.1-201ENST00000603308 1388 ntBASIC2.34□□□□□ -2.04
CD74P04233 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CD74P04233 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CD74P04233 MIR6073-201ENST00000352083 89 ntBASIC2.33□□□□□ -2.04
CD74P04233 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.33□□□□□ -2.04
CD74P04233 MIR506-201ENST00000384998 124 ntBASIC2.33□□□□□ -2.04
CD74P04233 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CD74P04233 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CD74P04233 SNORA48.5-201ENST00000391143 135 ntBASIC2.33□□□□□ -2.04
CD74P04233 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.33□□□□□ -2.04
CD74P04233 AC019178.2-201ENST00000423595 505 ntBASIC2.33□□□□□ -2.04
CD74P04233 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.33□□□□□ -2.04
CD74P04233 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.33□□□□□ -2.04
CD74P04233 NANOGP2-201ENST00000435391 727 ntBASIC2.33□□□□□ -2.04
CD74P04233 NDUFB4P6-201ENST00000436819 366 ntBASIC2.33□□□□□ -2.04
CD74P04233 AL358794.1-201ENST00000445689 381 ntBASIC2.33□□□□□ -2.04
CD74P04233 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.33□□□□□ -2.04
CD74P04233 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.33□□□□□ -2.04
CD74P04233 MTCYBP11-201ENST00000447254 1109 ntBASIC2.33□□□□□ -2.04
CD74P04233 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.33□□□□□ -2.04
CD74P04233 AC026410.2-201ENST00000460281 156 ntBASIC2.33□□□□□ -2.04
CD74P04233 RPL27AP5-201ENST00000469428 449 ntBASIC2.33□□□□□ -2.04
CD74P04233 AP000852.1-201ENST00000472460 573 ntBASIC2.33□□□□□ -2.04
CD74P04233 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CD74P04233 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.33□□□□□ -2.04
CD74P04233 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.33□□□□□ -2.04
CD74P04233 AC006445.2-201ENST00000510061 472 ntBASIC2.33□□□□□ -2.04
CD74P04233 AC008837.2-201ENST00000513076 418 ntBASIC2.33□□□□□ -2.04
CD74P04233 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.33□□□□□ -2.04
CD74P04233 RN7SKP40-201ENST00000517211 242 ntBASIC2.33□□□□□ -2.04
CD74P04233 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.33□□□□□ -2.04
CD74P04233 AP000867.2-201ENST00000532468 320 ntBASIC2.33□□□□□ -2.04
CD74P04233 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CD74P04233 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.33□□□□□ -2.04
CD74P04233 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.33□□□□□ -2.04
CD74P04233 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CD74P04233 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.33□□□□□ -2.04
CD74P04233 MIR4325-201ENST00000583049 90 ntBASIC2.33□□□□□ -2.04
CD74P04233 RPL23AP92-201ENST00000603609 255 ntBASIC2.33□□□□□ -2.04
CD74P04233 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.33□□□□□ -2.04
CD74P04233 AL157392.4-201ENST00000609756 345 ntBASIC2.33□□□□□ -2.04
CD74P04233 AC023158.2-201ENST00000614876 543 ntBASIC2.33□□□□□ -2.04
CD74P04233 AC022306.3-201ENST00000619930 550 ntBASIC2.33□□□□□ -2.04
CD74P04233 AL353748.2-201ENST00000622148 471 ntBASIC2.33□□□□□ -2.04
CD74P04233 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.33□□□□□ -2.04
CD74P04233 AC110079.1-202ENST00000635213 138 ntBASIC2.33□□□□□ -2.04
CD74P04233 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.33□□□□□ -2.04
CD74P04233 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CD74P04233 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.33□□□□□ -2.04
CD74P04233 AC008568.2-201ENST00000623862 2313 ntBASIC2.33□□□□□ -2.04
CD74P04233 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.32□□□□□ -2.04
CD74P04233 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CD74P04233 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CD74P04233 RNA5SP393-201ENST00000363423 117 ntBASIC2.32□□□□□ -2.04
CD74P04233 RNU1-105P-201ENST00000363470 161 ntBASIC2.32□□□□□ -2.04
CD74P04233 SNORA71.1-201ENST00000364523 117 ntBASIC2.32□□□□□ -2.04
CD74P04233 RNU6-1122P-201ENST00000384449 107 ntBASIC2.32□□□□□ -2.04
CD74P04233 RNU6-851P-201ENST00000384565 107 ntBASIC2.32□□□□□ -2.04
CD74P04233 RNU6-925P-201ENST00000384629 104 ntBASIC2.32□□□□□ -2.04
CD74P04233 DHFRP6-201ENST00000401776 268 ntBASIC2.32□□□□□ -2.04
CD74P04233 AL590084.1-201ENST00000407885 387 ntBASIC2.32□□□□□ -2.04
CD74P04233 AC068533.2-201ENST00000411872 306 ntBASIC2.32□□□□□ -2.04
CD74P04233 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.32□□□□□ -2.04
CD74P04233 AC006028.1-201ENST00000438379 402 ntBASIC2.32□□□□□ -2.04
CD74P04233 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.32□□□□□ -2.04
CD74P04233 AC112653.1-201ENST00000443851 386 ntBASIC2.32□□□□□ -2.04
CD74P04233 NIPA2P5-201ENST00000452282 464 ntBASIC2.32□□□□□ -2.04
CD74P04233 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.32□□□□□ -2.04
CD74P04233 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.32□□□□□ -2.04
CD74P04233 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.32□□□□□ -2.04
CD74P04233 AC023424.2-201ENST00000493479 777 ntBASIC2.32□□□□□ -2.04
CD74P04233 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms