Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL354719.1-201ENST00000406535 843 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 U3.39-201ENST00000408569 239 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 SNORA3.3-201ENST00000408712 125 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 CYCSP19-201ENST00000411715 316 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLPTM1O96005 RPL21P32-201ENST00000419877 477 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.3□□□□□ -1.88
CLPTM1O96005 RPL7P46-201ENST00000425129 740 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 RPL23AP82-202ENST00000427528 469 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.3□□□□□ -1.88
CLPTM1O96005 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLPTM1O96005 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.3□□□□□ -1.88
CLPTM1O96005 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.3□□□□□ -1.88
CLPTM1O96005 AL359073.1-201ENST00000448036 403 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.3□□□□□ -1.88
CLPTM1O96005 PDSS1P2-201ENST00000449397 678 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.3□□□□□ -1.88
CLPTM1O96005 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.3□□□□□ -1.88
CLPTM1O96005 RPS20P24-201ENST00000457473 361 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 CENPBD1P1-201ENST00000464061 469 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 RPS4XP10-201ENST00000465034 731 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.3□□□□□ -1.88
CLPTM1O96005 SNORA70.19-201ENST00000516717 90 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 RNU6-579P-201ENST00000516879 102 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 SCARNA14-201ENST00000516903 136 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 RNU6-1073P-201ENST00000517182 106 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 PAICSP4-201ENST00000517543 1253 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLPTM1O96005 OR4P1P-201ENST00000530808 1136 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.3□□□□□ -1.88
CLPTM1O96005 CYCSP30-201ENST00000546447 172 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.3□□□□□ -1.88
CLPTM1O96005 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.3□□□□□ -1.88
CLPTM1O96005 ZNF519P3-201ENST00000557158 1032 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.3□□□□□ -1.88
CLPTM1O96005 AC005771.1-201ENST00000585581 349 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.3□□□□□ -1.88
CLPTM1O96005 AL353997.4-201ENST00000586196 166 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.3□□□□□ -1.88
CLPTM1O96005 TPMTP1-201ENST00000592307 737 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 DEFB131E-202ENST00000602581 683 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AC079089.3-201ENST00000603094 673 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AC112191.3-201ENST00000604371 277 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AC138932.5-201ENST00000617759 563 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 U73479.1-201ENST00000618062 168 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 AL732618.1-201ENST00000623251 301 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.3□□□□□ -1.88
CLPTM1O96005 AC091925.2-201ENST00000625059 256 ntBASIC3.3□□□□□ -1.88
CLPTM1O96005 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.3□□□□□ -1.88
CLPTM1O96005 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLPTM1O96005 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.3□□□□□ -1.88
CLPTM1O96005 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLPTM1O96005 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.29□□□□□ -1.88
CLPTM1O96005 AC103988.1-201ENST00000566382 2177 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 CCT4P2-201ENST00000233836 1548 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.29□□□□□ -1.88
CLPTM1O96005 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLPTM1O96005 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.29□□□□□ -1.88
CLPTM1O96005 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.29□□□□□ -1.88
CLPTM1O96005 DYNLT3P1-201ENST00000378574 347 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 RNU6-1207P-201ENST00000384343 107 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AL356421.1-201ENST00000403255 413 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AL445189.1-201ENST00000405722 338 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 RN7SKP156-201ENST00000410308 342 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 RN7SKP202-201ENST00000410439 330 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPTM1O96005 SDCBPP3-201ENST00000419629 891 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPTM1O96005 RPL21P40-201ENST00000428586 483 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.29□□□□□ -1.88
CLPTM1O96005 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPTM1O96005 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPTM1O96005 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPTM1O96005 FAM103A2P-201ENST00000444122 354 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 MTND1P27-201ENST00000451117 902 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.29□□□□□ -1.88
CLPTM1O96005 HMGN2P13-201ENST00000476476 274 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AC011825.1-201ENST00000484967 388 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.29□□□□□ -1.88
CLPTM1O96005 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPTM1O96005 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CLPTM1O96005 RNA5SP164-201ENST00000516533 110 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 RNU6-405P-201ENST00000516637 110 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 RNU1-45P-201ENST00000517191 141 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPTM1O96005 ZNF415P1-201ENST00000582279 1166 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AC093227.2-201ENST00000589357 285 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AC073648.5-201ENST00000603502 305 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AC004492.1-201ENST00000607036 742 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 Z99129.1-201ENST00000612510 255 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.29□□□□□ -1.88
CLPTM1O96005 AC008498.1-201ENST00000613012 531 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AC008250.2-201ENST00000615261 205 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 AC026585.1-201ENST00000619582 524 ntBASIC3.29□□□□□ -1.88
CLPTM1O96005 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.29□□□□□ -1.88
CLPTM1O96005 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CLPTM1O96005 AC008264.2-201ENST00000610193 3731 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms