Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RPL30P5-201ENST00000494923 336 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC008837.2-201ENST00000513076 418 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC006499.2-201ENST00000513470 337 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN9O95484 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN9O95484 AC022080.3-201ENST00000544433 482 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN9O95484 AC090695.1-201ENST00000561269 1222 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN9O95484 AL355596.1-201ENST00000565399 3996 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC092435.3-201ENST00000565538 3654 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN9O95484 ZNF861P-201ENST00000588126 639 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.72□□□□□ -1.97
CLDN9O95484 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.72□□□□□ -1.97
CLDN9O95484 BBIP1P1-201ENST00000602999 279 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AL627309.6-201ENST00000606857 840 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC131902.3-201ENST00000611767 581 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC135507.2-201ENST00000612443 309 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 MIR6715A-201ENST00000615929 79 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC090617.7-201ENST00000623952 126 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC231657.1-201ENST00000624313 397 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AP000676.4-201ENST00000624659 623 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN9O95484 AC004808.1-201ENST00000627671 721 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 AC084035.1-201ENST00000634543 607 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.72□□□□□ -1.97
CLDN9O95484 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLDN9O95484 AC009487.2-201ENST00000420969 6821 ntBASIC2.72□□□□□ -1.97
CLDN9O95484 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CLDN9O95484 TPTE2P4-201ENST00000258589 1605 ntBASIC2.71□□□□□ -1.97
CLDN9O95484 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AC087359.1-201ENST00000508335 1740 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CLDN9O95484 AC005832.2-201ENST00000538921 1430 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CLDN9O95484 RNA5SP432-201ENST00000362480 116 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 Y_RNA.510-201ENST00000384511 114 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AL355143.1-201ENST00000407101 841 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN9O95484 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN9O95484 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN9O95484 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.71□□□□□ -1.98
CLDN9O95484 RPL35AP12-201ENST00000425362 338 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AC090774.1-201ENST00000435925 246 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN9O95484 ARPC3P5-201ENST00000448802 534 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 SETP11-201ENST00000473027 690 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.71□□□□□ -1.98
CLDN9O95484 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN9O95484 ARL4AP2-201ENST00000507378 601 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AC117522.3-201ENST00000507974 584 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN9O95484 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.71□□□□□ -1.98
CLDN9O95484 OR7K1P-201ENST00000546439 926 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 YWHAZP1-201ENST00000556286 722 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.71□□□□□ -1.98
CLDN9O95484 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN9O95484 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.71□□□□□ -1.98
CLDN9O95484 BNIP3P27-201ENST00000599991 412 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AC079089.3-201ENST00000603094 673 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AC011451.2-201ENST00000604303 598 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AC021749.1-201ENST00000604322 607 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AC004067.1-201ENST00000608733 700 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 LINC02211-204ENST00000642024 1070 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AL161431.1-201ENST00000618966 4205 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.71□□□□□ -1.98
CLDN9O95484 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.71□□□□□ -1.98
CLDN9O95484 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
CLDN9O95484 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN9O95484 RNU6-343P-201ENST00000364709 104 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 Y_RNA.548-201ENST00000384656 105 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 AL512633.1-201ENST00000399931 655 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 MIR1289-1-201ENST00000408836 144 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN9O95484 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN9O95484 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN9O95484 AC234781.2-201ENST00000426370 994 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 OR4K11P-201ENST00000431829 904 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 RPL23AP58-201ENST00000440453 469 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 AC025750.2-201ENST00000442609 450 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 RNF2P1-201ENST00000442955 1010 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN9O95484 AC097493.1-201ENST00000463958 372 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 AC011979.1-201ENST00000472300 483 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 HSPE1P6-201ENST00000479457 291 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 FAM172BP-201ENST00000487497 1089 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN9O95484 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN9O95484 RAC1P5-201ENST00000512182 576 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN9O95484 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.7□□□□□ -1.98
CLDN9O95484 SNORA31.22-201ENST00000517204 135 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN9O95484 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.7□□□□□ -1.98
CLDN9O95484 AADACP1-206ENST00000561502 1193 ntBASIC2.7□□□□□ -1.98
CLDN9O95484 AL512347.1-201ENST00000566420 503 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms