Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.84□□□□□ -1.95
PCF11O94913 AC104986.1-201ENST00000517978 436 ntBASIC2.84□□□□□ -1.95
PCF11O94913 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.84□□□□□ -1.95
PCF11O94913 AL512598.1-201ENST00000610158 273 ntBASIC2.84□□□□□ -1.95
PCF11O94913 MIR3199-2-201ENST00000636243 86 ntBASIC2.84□□□□□ -1.95
PCF11O94913 MTCO1P6-201ENST00000481192 1384 ntBASIC2.84□□□□□ -1.96
PCF11O94913 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCF11O94913 RNU6-342P-201ENST00000384521 104 ntBASIC2.83□□□□□ -1.96
PCF11O94913 RNU1-101P-201ENST00000391171 127 ntBASIC2.83□□□□□ -1.96
PCF11O94913 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.83□□□□□ -1.96
PCF11O94913 RPS15AP40-201ENST00000419621 391 ntBASIC2.83□□□□□ -1.96
PCF11O94913 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.83□□□□□ -1.96
PCF11O94913 ARL5AP3-201ENST00000439327 386 ntBASIC2.83□□□□□ -1.96
PCF11O94913 MTND4LP16-201ENST00000440828 295 ntBASIC2.83□□□□□ -1.96
PCF11O94913 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.83□□□□□ -1.96
PCF11O94913 FABP5P6-201ENST00000510588 409 ntBASIC2.83□□□□□ -1.96
PCF11O94913 AC109635.4-202ENST00000531666 412 ntBASIC2.83□□□□□ -1.96
PCF11O94913 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.83□□□□□ -1.96
PCF11O94913 U73479.1-201ENST00000618062 168 ntBASIC2.83□□□□□ -1.96
PCF11O94913 AC025048.6-202ENST00000627667 438 ntBASIC2.83□□□□□ -1.96
PCF11O94913 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.83□□□□□ -1.96
PCF11O94913 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
PCF11O94913 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.83□□□□□ -1.96
PCF11O94913 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.83□□□□□ -1.96
PCF11O94913 AC023128.2-201ENST00000420880 1223 ntBASIC2.83□□□□□ -1.96
PCF11O94913 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.83□□□□□ -1.96
PCF11O94913 AC104308.1-201ENST00000454621 333 ntBASIC2.83□□□□□ -1.96
PCF11O94913 MTCO3P35-201ENST00000485582 781 ntBASIC2.83□□□□□ -1.96
PCF11O94913 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.83□□□□□ -1.96
PCF11O94913 AF279873.1-201ENST00000523393 313 ntBASIC2.83□□□□□ -1.96
PCF11O94913 AC087441.2-201ENST00000529141 262 ntBASIC2.83□□□□□ -1.96
PCF11O94913 POLR2KP1-201ENST00000553226 168 ntBASIC2.83□□□□□ -1.96
PCF11O94913 AC098848.2-201ENST00000588023 330 ntBASIC2.83□□□□□ -1.96
PCF11O94913 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
PCF11O94913 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCF11O94913 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.82□□□□□ -1.96
PCF11O94913 RNU6-50P-201ENST00000362356 103 ntBASIC2.82□□□□□ -1.96
PCF11O94913 RNA5SP37-201ENST00000365420 130 ntBASIC2.82□□□□□ -1.96
PCF11O94913 RPL19P1-201ENST00000411635 428 ntBASIC2.82□□□□□ -1.96
PCF11O94913 WARS2P1-201ENST00000429678 537 ntBASIC2.82□□□□□ -1.96
PCF11O94913 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.82□□□□□ -1.96
PCF11O94913 HMGN2P13-201ENST00000476476 274 ntBASIC2.82□□□□□ -1.96
PCF11O94913 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.82□□□□□ -1.96
PCF11O94913 AC021146.8-201ENST00000507455 733 ntBASIC2.82□□□□□ -1.96
PCF11O94913 RNA5SP468-201ENST00000516782 93 ntBASIC2.82□□□□□ -1.96
PCF11O94913 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.82□□□□□ -1.96
PCF11O94913 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.82□□□□□ -1.96
PCF11O94913 AL109653.1-201ENST00000603091 248 ntBASIC2.82□□□□□ -1.96
PCF11O94913 MIR6515-201ENST00000619843 57 ntBASIC2.82□□□□□ -1.96
PCF11O94913 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.82□□□□□ -1.96
PCF11O94913 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.82□□□□□ -1.96
PCF11O94913 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCF11O94913 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCF11O94913 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCF11O94913 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCF11O94913 OR51AB1P-201ENST00000429046 620 ntBASIC2.81□□□□□ -1.96
PCF11O94913 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.81□□□□□ -1.96
PCF11O94913 HMGB1P38-201ENST00000490557 577 ntBASIC2.81□□□□□ -1.96
PCF11O94913 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.81□□□□□ -1.96
PCF11O94913 SNORA31.15-201ENST00000516771 132 ntBASIC2.81□□□□□ -1.96
PCF11O94913 MTND2P26-201ENST00000528255 1029 ntBASIC2.81□□□□□ -1.96
PCF11O94913 CBX3P4-201ENST00000538909 354 ntBASIC2.81□□□□□ -1.96
PCF11O94913 AC090751.1-201ENST00000566966 267 ntBASIC2.81□□□□□ -1.96
PCF11O94913 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCF11O94913 VN1R74P-201ENST00000613259 503 ntBASIC2.81□□□□□ -1.96
PCF11O94913 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.81□□□□□ -1.96
PCF11O94913 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PCF11O94913 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.8□□□□□ -1.96
PCF11O94913 NUP35P2-201ENST00000416748 943 ntBASIC2.8□□□□□ -1.96
PCF11O94913 AC017099.1-201ENST00000448261 1028 ntBASIC2.8□□□□□ -1.96
PCF11O94913 Z99714.1-201ENST00000450463 807 ntBASIC2.8□□□□□ -1.96
PCF11O94913 AL035407.2-201ENST00000454090 378 ntBASIC2.8□□□□□ -1.96
PCF11O94913 AL109741.2-201ENST00000455561 343 ntBASIC2.8□□□□□ -1.96
PCF11O94913 RPS15AP1-201ENST00000457423 391 ntBASIC2.8□□□□□ -1.96
PCF11O94913 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.8□□□□□ -1.96
PCF11O94913 RPL23AP55-201ENST00000498163 452 ntBASIC2.8□□□□□ -1.96
PCF11O94913 AC111193.1-201ENST00000504097 155 ntBASIC2.8□□□□□ -1.96
PCF11O94913 ATP5EP1-201ENST00000510257 156 ntBASIC2.8□□□□□ -1.96
PCF11O94913 SNORD59.2-201ENST00000516873 68 ntBASIC2.8□□□□□ -1.96
PCF11O94913 RNU6-1073P-201ENST00000517182 106 ntBASIC2.8□□□□□ -1.96
PCF11O94913 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.8□□□□□ -1.96
PCF11O94913 MTCYBP41-201ENST00000528913 1123 ntBASIC2.8□□□□□ -1.96
PCF11O94913 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.8□□□□□ -1.96
PCF11O94913 AP001029.3-201ENST00000588063 596 ntBASIC2.8□□□□□ -1.96
PCF11O94913 AL035411.2-201ENST00000604022 421 ntBASIC2.8□□□□□ -1.96
PCF11O94913 HMGB1P51-201ENST00000605166 638 ntBASIC2.8□□□□□ -1.96
PCF11O94913 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.8□□□□□ -1.96
PCF11O94913 RNU6-335P-201ENST00000364563 113 ntBASIC2.79□□□□□ -1.96
PCF11O94913 RNU2-21P-201ENST00000410368 188 ntBASIC2.79□□□□□ -1.96
PCF11O94913 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.79□□□□□ -1.96
PCF11O94913 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.79□□□□□ -1.96
PCF11O94913 AL627224.1-201ENST00000448334 444 ntBASIC2.79□□□□□ -1.96
PCF11O94913 C1DP3-201ENST00000455013 423 ntBASIC2.79□□□□□ -1.96
PCF11O94913 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.79□□□□□ -1.96
PCF11O94913 AC092991.1-201ENST00000477176 376 ntBASIC2.79□□□□□ -1.96
PCF11O94913 AC090453.1-201ENST00000495560 436 ntBASIC2.79□□□□□ -1.96
PCF11O94913 AC098799.2-201ENST00000509466 868 ntBASIC2.79□□□□□ -1.96
PCF11O94913 AL731537.2-201ENST00000561565 951 ntBASIC2.79□□□□□ -1.96
PCF11O94913 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.79□□□□□ -1.96
PCF11O94913 MIR6895-201ENST00000613497 78 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms