Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RNF138P1-201ENST00000502765 546 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.83□□□□□ -1.8
CNOT3O75175 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.83□□□□□ -1.8
CNOT3O75175 FTH1P9-201ENST00000513251 355 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 RNU6-875P-201ENST00000516488 106 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.83□□□□□ -1.8
CNOT3O75175 AP003497.1-201ENST00000528472 562 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.83□□□□□ -1.8
CNOT3O75175 AP003034.1-201ENST00000534621 422 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.83□□□□□ -1.8
CNOT3O75175 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNOT3O75175 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.83□□□□□ -1.8
CNOT3O75175 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.83□□□□□ -1.8
CNOT3O75175 AC112230.1-201ENST00000604342 547 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 AC007621.1-201ENST00000604544 437 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 AC093788.1-201ENST00000609356 927 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.83□□□□□ -1.8
CNOT3O75175 AC091953.2-201ENST00000623979 160 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 AC138915.3-201ENST00000562908 1389 ntBASIC3.83□□□□□ -1.8
CNOT3O75175 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.83□□□□□ -1.8
CNOT3O75175 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.83□□□□□ -1.8
CNOT3O75175 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CNOT3O75175 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CNOT3O75175 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CNOT3O75175 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CNOT3O75175 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNOT3O75175 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.82□□□□□ -1.8
CNOT3O75175 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CNOT3O75175 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNOT3O75175 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
CNOT3O75175 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CNOT3O75175 Y_RNA.61-201ENST00000362835 102 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 RNY1P12-201ENST00000364251 105 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 RNY4P16-201ENST00000364768 94 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CNOT3O75175 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 RNU2-41P-201ENST00000410991 178 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 CYCSP19-201ENST00000411715 316 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 OR51A5P-201ENST00000415429 942 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AC127526.1-201ENST00000417526 366 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 ELOCP4-201ENST00000420090 333 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AL353193.1-201ENST00000421444 268 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AC007283.2-201ENST00000424739 197 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AL691449.1-201ENST00000426570 421 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AC006548.1-201ENST00000427470 102 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 OR51AB1P-201ENST00000429046 620 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.82□□□□□ -1.8
CNOT3O75175 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.82□□□□□ -1.8
CNOT3O75175 RPS11P1-201ENST00000451072 473 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 ELOCP23-201ENST00000452014 332 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AP000852.1-201ENST00000472460 573 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.82□□□□□ -1.8
CNOT3O75175 AC093677.1-201ENST00000514414 678 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.82□□□□□ -1.8
CNOT3O75175 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.82□□□□□ -1.8
CNOT3O75175 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.82□□□□□ -1.8
CNOT3O75175 AC022790.1-201ENST00000522872 204 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.82□□□□□ -1.8
CNOT3O75175 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.82□□□□□ -1.8
CNOT3O75175 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.82□□□□□ -1.8
CNOT3O75175 AL161713.1-201ENST00000555538 145 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AL356432.3-201ENST00000568952 465 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AC090615.1-201ENST00000577519 154 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.82□□□□□ -1.8
CNOT3O75175 UBE2V2P2-201ENST00000587677 504 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.82□□□□□ -1.8
CNOT3O75175 AL162413.1-201ENST00000603198 110 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AL606490.9-201ENST00000603331 271 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 Z84480.1-201ENST00000605131 311 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AP003117.2-201ENST00000606010 545 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 AL391813.2-201ENST00000609113 322 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 CR381572.1-201ENST00000625098 102 ntBASIC3.82□□□□□ -1.8
CNOT3O75175 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.82□□□□□ -1.8
CNOT3O75175 NUP58P1-201ENST00000502546 1738 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT3O75175 NMD3P1-201ENST00000439704 1488 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT3O75175 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.81□□□□□ -1.8
CNOT3O75175 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CNOT3O75175 SNORD56.2-201ENST00000363242 71 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 Y_RNA.159-201ENST00000363674 87 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 RNU6-1322P-201ENST00000364309 107 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 Y_RNA.234-201ENST00000364409 97 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT3O75175 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CNOT3O75175 SNORA48.7-201ENST00000391302 135 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 HMGN2P8-201ENST00000391458 268 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 AC068050.1-201ENST00000394891 380 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.81□□□□□ -1.8
CNOT3O75175 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.81□□□□□ -1.8
CNOT3O75175 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.81□□□□□ -1.8
CNOT3O75175 MTATP6P18-201ENST00000417994 673 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.81□□□□□ -1.8
CNOT3O75175 AC012065.2-201ENST00000421295 375 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 RPL30P3-201ENST00000424262 333 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 RPL7P2-201ENST00000427639 268 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 BNIP3P2-201ENST00000441221 577 ntBASIC3.81□□□□□ -1.8
CNOT3O75175 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms