Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CCNG1P1-201ENST00000406783 885 ntBASIC3.65□□□□□ -1.83
LDB2O43679 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.65□□□□□ -1.83
LDB2O43679 MTCYBP24-201ENST00000420387 1106 ntBASIC3.65□□□□□ -1.83
LDB2O43679 MTND4LP11-201ENST00000422184 280 ntBASIC3.65□□□□□ -1.83
LDB2O43679 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.65□□□□□ -1.83
LDB2O43679 TIMM9P3-201ENST00000428659 274 ntBASIC3.65□□□□□ -1.83
LDB2O43679 MTND4LP10-201ENST00000435146 291 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.65□□□□□ -1.83
LDB2O43679 AL451074.3-201ENST00000437709 472 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AL590399.6-201ENST00000446396 307 ntBASIC3.65□□□□□ -1.83
LDB2O43679 C1DP4-201ENST00000455429 424 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.65□□□□□ -1.83
LDB2O43679 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
LDB2O43679 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB2O43679 MTAPP1-201ENST00000489154 819 ntBASIC3.65□□□□□ -1.83
LDB2O43679 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB2O43679 PTGES3P3-201ENST00000511479 482 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC010493.1-201ENST00000513479 292 ntBASIC3.65□□□□□ -1.83
LDB2O43679 RNU6-718P-201ENST00000516166 105 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB2O43679 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.65□□□□□ -1.83
LDB2O43679 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.65□□□□□ -1.83
LDB2O43679 SETP7-201ENST00000552169 453 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.65□□□□□ -1.83
LDB2O43679 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.65□□□□□ -1.83
LDB2O43679 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.65□□□□□ -1.83
LDB2O43679 MIR3118-1-201ENST00000581787 76 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.65□□□□□ -1.83
LDB2O43679 AC060771.1-201ENST00000582031 164 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AL669831.4-202ENST00000590817 238 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC068790.3-201ENST00000602988 553 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC024220.1-201ENST00000603675 484 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.65□□□□□ -1.83
LDB2O43679 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.65□□□□□ -1.83
LDB2O43679 AL713922.2-201ENST00000619384 716 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AL359880.1-201ENST00000621879 266 ntBASIC3.65□□□□□ -1.83
LDB2O43679 AC091953.2-201ENST00000623979 160 ntBASIC3.65□□□□□ -1.83
LDB2O43679 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LDB2O43679 AL732372.2-225ENST00000642124 456 ntBASIC3.65□□□□□ -1.83
LDB2O43679 ZNF285B-201ENST00000561698 1767 ntBASIC3.65□□□□□ -1.83
LDB2O43679 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LDB2O43679 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB2O43679 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB2O43679 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDB2O43679 AC007656.2-201ENST00000624902 4547 ntBASIC3.64□□□□□ -1.83
LDB2O43679 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
LDB2O43679 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
LDB2O43679 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDB2O43679 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB2O43679 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDB2O43679 RNA5SP51-201ENST00000364750 119 ntBASIC3.64□□□□□ -1.83
LDB2O43679 RNU6-1283P-201ENST00000365314 105 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.64□□□□□ -1.83
LDB2O43679 MIR153-1-201ENST00000384914 90 ntBASIC3.64□□□□□ -1.83
LDB2O43679 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LDB2O43679 AL078595.1-201ENST00000404458 226 ntBASIC3.64□□□□□ -1.83
LDB2O43679 RNU4-55P-201ENST00000410731 137 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC127391.1-201ENST00000411737 98 ntBASIC3.64□□□□□ -1.83
LDB2O43679 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB2O43679 AC233728.2-201ENST00000425348 757 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC006548.1-201ENST00000427470 102 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC133104.1-201ENST00000429100 218 ntBASIC3.64□□□□□ -1.83
LDB2O43679 RPL31P35-201ENST00000431058 377 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AL596276.1-201ENST00000434465 418 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC104850.1-201ENST00000435940 476 ntBASIC3.64□□□□□ -1.83
LDB2O43679 RBMX2P4-201ENST00000441256 376 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.64□□□□□ -1.83
LDB2O43679 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB2O43679 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.64□□□□□ -1.83
LDB2O43679 AC146507.1-201ENST00000468335 354 ntBASIC3.64□□□□□ -1.83
LDB2O43679 MTCO3P38-201ENST00000468910 766 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC055855.1-201ENST00000489563 579 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC106872.2-201ENST00000494303 480 ntBASIC3.64□□□□□ -1.83
LDB2O43679 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.64□□□□□ -1.83
LDB2O43679 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.64□□□□□ -1.83
LDB2O43679 HMGN1P11-201ENST00000508668 303 ntBASIC3.64□□□□□ -1.83
LDB2O43679 FTH1P9-201ENST00000513251 355 ntBASIC3.64□□□□□ -1.83
LDB2O43679 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.64□□□□□ -1.83
LDB2O43679 Vault.1-201ENST00000516474 102 ntBASIC3.64□□□□□ -1.83
LDB2O43679 Vault.3-201ENST00000516676 95 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB2O43679 AP001893.2-201ENST00000526949 202 ntBASIC3.64□□□□□ -1.83
LDB2O43679 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.64□□□□□ -1.83
LDB2O43679 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.64□□□□□ -1.83
LDB2O43679 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.64□□□□□ -1.83
LDB2O43679 AL845331.3-202ENST00000562856 261 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC107954.1-201ENST00000565906 727 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC234778.2-201ENST00000566241 354 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC092325.1-201ENST00000566449 554 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB2O43679 SNORA59B-202ENST00000578183 701 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC008739.3-201ENST00000603262 127 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC055876.5-201ENST00000605667 259 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC092954.2-201ENST00000609103 430 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AL161734.1-201ENST00000609720 557 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AL133173.2-201ENST00000614270 90 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AL590099.1-201ENST00000615276 138 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC002550.2-201ENST00000621246 394 ntBASIC3.64□□□□□ -1.83
LDB2O43679 AC009268.2-201ENST00000621925 457 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms