Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC2.28□□□□□ -2.04
SGCEO43556 MIR7106-201ENST00000612419 65 ntBASIC2.28□□□□□ -2.04
SGCEO43556 VN1R74P-201ENST00000613259 503 ntBASIC2.28□□□□□ -2.04
SGCEO43556 CRYM-AS1-204ENST00000637983 556 ntBASIC2.28□□□□□ -2.04
SGCEO43556 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.28□□□□□ -2.04
SGCEO43556 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
SGCEO43556 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.28□□□□□ -2.04
SGCEO43556 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
SGCEO43556 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SGCEO43556 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
SGCEO43556 AL355596.1-201ENST00000565399 3996 ntBASIC2.27□□□□□ -2.05
SGCEO43556 SNORD62.1-201ENST00000362541 86 ntBASIC2.27□□□□□ -2.05
SGCEO43556 RNU5A-1-201ENST00000362698 116 ntBASIC2.27□□□□□ -2.05
SGCEO43556 RNU6-492P-201ENST00000363035 104 ntBASIC2.27□□□□□ -2.05
SGCEO43556 RNU6-1066P-201ENST00000363573 105 ntBASIC2.27□□□□□ -2.05
SGCEO43556 RNU6-461P-201ENST00000364195 107 ntBASIC2.27□□□□□ -2.05
SGCEO43556 TAF13P2-201ENST00000416876 286 ntBASIC2.27□□□□□ -2.05
SGCEO43556 USP9YP20-201ENST00000419224 558 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AL121882.1-201ENST00000422893 417 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AC098614.2-201ENST00000426040 255 ntBASIC2.27□□□□□ -2.05
SGCEO43556 THAP5P1-201ENST00000439089 262 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.27□□□□□ -2.05
SGCEO43556 AC011753.1-201ENST00000451001 220 ntBASIC2.27□□□□□ -2.05
SGCEO43556 CACYBPP2-201ENST00000453625 678 ntBASIC2.27□□□□□ -2.05
SGCEO43556 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.27□□□□□ -2.05
SGCEO43556 SNORD109B-201ENST00000458961 67 ntBASIC2.27□□□□□ -2.05
SGCEO43556 SNORD109A-201ENST00000459128 67 ntBASIC2.27□□□□□ -2.05
SGCEO43556 RBM43P1-201ENST00000476891 1081 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.27□□□□□ -2.05
SGCEO43556 HMGB3P3-201ENST00000510526 400 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AC034159.1-201ENST00000513885 583 ntBASIC2.27□□□□□ -2.05
SGCEO43556 RNA5SP282-201ENST00000516355 108 ntBASIC2.27□□□□□ -2.05
SGCEO43556 SNORA48.10-201ENST00000516965 160 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.27□□□□□ -2.05
SGCEO43556 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.27□□□□□ -2.05
SGCEO43556 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.27□□□□□ -2.05
SGCEO43556 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SGCEO43556 AC007115.1-201ENST00000546853 234 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AC121758.2-201ENST00000553271 193 ntBASIC2.27□□□□□ -2.05
SGCEO43556 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.27□□□□□ -2.05
SGCEO43556 OR4K8P-201ENST00000578842 1048 ntBASIC2.27□□□□□ -2.05
SGCEO43556 MIR5092-201ENST00000583139 88 ntBASIC2.27□□□□□ -2.05
SGCEO43556 VN1R90P-201ENST00000595717 726 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AL022067.1-201ENST00000602426 454 ntBASIC2.27□□□□□ -2.05
SGCEO43556 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
SGCEO43556 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.27□□□□□ -2.05
SGCEO43556 AC090132.2-201ENST00000615881 347 ntBASIC2.27□□□□□ -2.05
SGCEO43556 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.27□□□□□ -2.05
SGCEO43556 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.27□□□□□ -2.05
SGCEO43556 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SGCEO43556 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.26□□□□□ -2.05
SGCEO43556 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SGCEO43556 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SGCEO43556 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.26□□□□□ -2.05
SGCEO43556 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SGCEO43556 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
SGCEO43556 AL356131.1-201ENST00000405826 414 ntBASIC2.26□□□□□ -2.05
SGCEO43556 RNU6-575P-201ENST00000411326 105 ntBASIC2.26□□□□□ -2.05
SGCEO43556 Z85995.1-201ENST00000415547 335 ntBASIC2.26□□□□□ -2.05
SGCEO43556 ARL5AP4-201ENST00000430731 512 ntBASIC2.26□□□□□ -2.05
SGCEO43556 AL512844.2-201ENST00000433990 593 ntBASIC2.26□□□□□ -2.05
SGCEO43556 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.26□□□□□ -2.05
SGCEO43556 FGF7P5-201ENST00000441829 291 ntBASIC2.26□□□□□ -2.05
SGCEO43556 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.26□□□□□ -2.05
SGCEO43556 GXYLT1P1-201ENST00000446657 490 ntBASIC2.26□□□□□ -2.05
SGCEO43556 VN1R10P-201ENST00000447106 875 ntBASIC2.26□□□□□ -2.05
SGCEO43556 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.26□□□□□ -2.05
SGCEO43556 AC092155.2-201ENST00000454675 477 ntBASIC2.26□□□□□ -2.05
SGCEO43556 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.26□□□□□ -2.05
SGCEO43556 MTND2P30-201ENST00000456663 382 ntBASIC2.26□□□□□ -2.05
SGCEO43556 SRIP1-201ENST00000489235 288 ntBASIC2.26□□□□□ -2.05
SGCEO43556 AC112518.2-201ENST00000508565 425 ntBASIC2.26□□□□□ -2.05
SGCEO43556 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.26□□□□□ -2.05
SGCEO43556 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.26□□□□□ -2.05
SGCEO43556 AC087808.1-201ENST00000520501 361 ntBASIC2.26□□□□□ -2.05
SGCEO43556 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.26□□□□□ -2.05
SGCEO43556 SUB1P1-201ENST00000524415 382 ntBASIC2.26□□□□□ -2.05
SGCEO43556 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SGCEO43556 AC123904.3-201ENST00000547218 814 ntBASIC2.26□□□□□ -2.05
SGCEO43556 EIF4BP1-201ENST00000554881 351 ntBASIC2.26□□□□□ -2.05
SGCEO43556 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
SGCEO43556 AC068135.2-201ENST00000569293 1028 ntBASIC2.26□□□□□ -2.05
SGCEO43556 MIR4666A-201ENST00000580160 79 ntBASIC2.26□□□□□ -2.05
SGCEO43556 MIR3117-201ENST00000584034 78 ntBASIC2.26□□□□□ -2.05
SGCEO43556 DUXAP11-201ENST00000603858 526 ntBASIC2.26□□□□□ -2.05
SGCEO43556 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.26□□□□□ -2.05
SGCEO43556 AC006213.4-201ENST00000616184 634 ntBASIC2.26□□□□□ -2.05
SGCEO43556 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.26□□□□□ -2.05
SGCEO43556 AC010872.1-201ENST00000624225 675 ntBASIC2.26□□□□□ -2.05
SGCEO43556 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.26□□□□□ -2.05
SGCEO43556 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.26□□□□□ -2.05
SGCEO43556 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SGCEO43556 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
SGCEO43556 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.26□□□□□ -2.05
SGCEO43556 AC005832.2-201ENST00000538921 1430 ntBASIC2.25□□□□□ -2.05
SGCEO43556 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.25□□□□□ -2.05
SGCEO43556 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
SGCEO43556 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.25□□□□□ -2.05
SGCEO43556 CCDC58P2-201ENST00000417131 366 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms