Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ARPC3P1-201ENST00000437218 533 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AL359385.1-201ENST00000456509 365 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AC146507.1-201ENST00000468335 354 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AC068305.1-201ENST00000497406 726 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AC020893.1-201ENST00000502452 580 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.82□□□□□ -1.8
MSI1O43347 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.82□□□□□ -1.8
MSI1O43347 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.82□□□□□ -1.8
MSI1O43347 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.82□□□□□ -1.8
MSI1O43347 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.82□□□□□ -1.8
MSI1O43347 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.82□□□□□ -1.8
MSI1O43347 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
MSI1O43347 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.82□□□□□ -1.8
MSI1O43347 CCNG2P1-201ENST00000549521 1000 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.82□□□□□ -1.8
MSI1O43347 AC007424.1-203ENST00000554613 687 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.82□□□□□ -1.8
MSI1O43347 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.82□□□□□ -1.8
MSI1O43347 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.82□□□□□ -1.8
MSI1O43347 AC121334.2-201ENST00000605387 271 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AC011816.2-201ENST00000607089 556 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AC090517.2-201ENST00000614966 680 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AC112204.3-201ENST00000623822 332 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AC124864.2-201ENST00000624736 186 ntBASIC3.82□□□□□ -1.8
MSI1O43347 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.82□□□□□ -1.8
MSI1O43347 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.82□□□□□ -1.8
MSI1O43347 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MSI1O43347 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
MSI1O43347 AC006504.1-201ENST00000562493 3666 ntBASIC3.82□□□□□ -1.8
MSI1O43347 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
MSI1O43347 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.81□□□□□ -1.8
MSI1O43347 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.81□□□□□ -1.8
MSI1O43347 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.81□□□□□ -1.8
MSI1O43347 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
MSI1O43347 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.81□□□□□ -1.8
MSI1O43347 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MSI1O43347 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MSI1O43347 RNY4P16-201ENST00000364768 94 ntBASIC3.81□□□□□ -1.8
MSI1O43347 RNU6-282P-201ENST00000365357 103 ntBASIC3.81□□□□□ -1.8
MSI1O43347 RNU6-356P-201ENST00000384140 107 ntBASIC3.81□□□□□ -1.8
MSI1O43347 ATP5A1P2-201ENST00000412323 255 ntBASIC3.81□□□□□ -1.8
MSI1O43347 CRYBB2P1-203ENST00000415709 538 ntBASIC3.81□□□□□ -1.8
MSI1O43347 PIGFP2-201ENST00000421400 651 ntBASIC3.81□□□□□ -1.8
MSI1O43347 AC069157.1-201ENST00000421749 137 ntBASIC3.81□□□□□ -1.8
MSI1O43347 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.81□□□□□ -1.8
MSI1O43347 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.81□□□□□ -1.8
MSI1O43347 ATP5HP2-201ENST00000433885 485 ntBASIC3.81□□□□□ -1.8
MSI1O43347 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.81□□□□□ -1.8
MSI1O43347 UBE2V1P13-201ENST00000436983 439 ntBASIC3.81□□□□□ -1.8
MSI1O43347 RPS3AP46-201ENST00000448352 682 ntBASIC3.81□□□□□ -1.8
MSI1O43347 AC003071.1-201ENST00000451219 789 ntBASIC3.81□□□□□ -1.8
MSI1O43347 C1DP4-201ENST00000455429 424 ntBASIC3.81□□□□□ -1.8
MSI1O43347 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.81□□□□□ -1.8
MSI1O43347 RN7SL93P-201ENST00000463035 293 ntBASIC3.81□□□□□ -1.8
MSI1O43347 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.81□□□□□ -1.8
MSI1O43347 RPL23AP41-201ENST00000484754 458 ntBASIC3.81□□□□□ -1.8
MSI1O43347 NIPA2P2-201ENST00000496376 1083 ntBASIC3.81□□□□□ -1.8
MSI1O43347 PTGES3P3-201ENST00000511479 482 ntBASIC3.81□□□□□ -1.8
MSI1O43347 RNU6-314P-201ENST00000516574 104 ntBASIC3.81□□□□□ -1.8
MSI1O43347 RNU4-60P-201ENST00000517239 135 ntBASIC3.81□□□□□ -1.8
MSI1O43347 AC026403.1-201ENST00000518938 295 ntBASIC3.81□□□□□ -1.8
MSI1O43347 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.81□□□□□ -1.8
MSI1O43347 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.81□□□□□ -1.8
MSI1O43347 SETP2-201ENST00000553886 926 ntBASIC3.81□□□□□ -1.8
MSI1O43347 RBM11P1-201ENST00000604951 799 ntBASIC3.81□□□□□ -1.8
MSI1O43347 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.81□□□□□ -1.8
MSI1O43347 AL592295.2-201ENST00000612578 206 ntBASIC3.81□□□□□ -1.8
MSI1O43347 CR381653.2-201ENST00000624041 768 ntBASIC3.81□□□□□ -1.8
MSI1O43347 AL159972.1-201ENST00000625150 448 ntBASIC3.81□□□□□ -1.8
MSI1O43347 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
MSI1O43347 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
MSI1O43347 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MSI1O43347 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
MSI1O43347 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
MSI1O43347 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MSI1O43347 AC106871.1-201ENST00000568324 3102 ntBASIC3.8□□□□□ -1.8
MSI1O43347 AC007685.1-201ENST00000329806 452 ntBASIC3.8□□□□□ -1.8
MSI1O43347 MIR208A-201ENST00000362287 71 ntBASIC3.8□□□□□ -1.8
MSI1O43347 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
MSI1O43347 MIR19A-201ENST00000384878 82 ntBASIC3.8□□□□□ -1.8
MSI1O43347 MIR200C-201ENST00000384980 68 ntBASIC3.8□□□□□ -1.8
MSI1O43347 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
MSI1O43347 RPL30P2-201ENST00000414021 291 ntBASIC3.8□□□□□ -1.8
MSI1O43347 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.8□□□□□ -1.8
MSI1O43347 ISCA1P1-201ENST00000426679 387 ntBASIC3.8□□□□□ -1.8
MSI1O43347 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.8□□□□□ -1.8
MSI1O43347 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.8□□□□□ -1.8
MSI1O43347 NPM1P49-201ENST00000448027 714 ntBASIC3.8□□□□□ -1.8
MSI1O43347 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.8□□□□□ -1.8
MSI1O43347 RPS3AP14-201ENST00000483907 780 ntBASIC3.8□□□□□ -1.8
MSI1O43347 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.8□□□□□ -1.8
MSI1O43347 HMGB1P29-201ENST00000505659 499 ntBASIC3.8□□□□□ -1.8
MSI1O43347 AC010587.1-201ENST00000505809 469 ntBASIC3.8□□□□□ -1.8
MSI1O43347 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.8□□□□□ -1.8
MSI1O43347 SNORA70.18-201ENST00000516696 98 ntBASIC3.8□□□□□ -1.8
MSI1O43347 RNU6-528P-201ENST00000516926 100 ntBASIC3.8□□□□□ -1.8
MSI1O43347 RNU6-1231P-201ENST00000517185 103 ntBASIC3.8□□□□□ -1.8
MSI1O43347 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.8□□□□□ -1.8
MSI1O43347 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.8□□□□□ -1.8
MSI1O43347 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms