Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 ARL4AP2-201ENST00000507378 601 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 RNA5SP385-201ENST00000515947 110 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 OR7K1P-201ENST00000546439 926 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN3O15551 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN3O15551 AL512347.1-201ENST00000566420 503 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN3O15551 AC006504.3-201ENST00000586818 523 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 ZNF861P-201ENST00000588126 639 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 AC004987.4-201ENST00000603383 338 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 AC004067.1-201ENST00000608733 700 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 AC084035.1-201ENST00000634543 607 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 AC087359.1-201ENST00000508335 1740 ntBASIC3.04□□□□□ -1.92
CLDN3O15551 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN3O15551 Y_RNA.234-201ENST00000364409 97 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AL592148.1-201ENST00000413568 445 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 RPL7P10-201ENST00000417407 739 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.03□□□□□ -1.92
CLDN3O15551 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 AL390023.1-201ENST00000428836 262 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 SETP8-201ENST00000435341 628 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN3O15551 MTCO2P25-201ENST00000447065 681 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN3O15551 MTND2P24-201ENST00000453434 806 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN3O15551 AC097493.1-201ENST00000463958 372 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AC011979.1-201ENST00000472300 483 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 HSPE1P6-201ENST00000479457 291 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 RPL30P5-201ENST00000494923 336 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 AC006499.2-201ENST00000513470 337 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN3O15551 RN7SKP132-201ENST00000516001 208 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 COX6CP8-201ENST00000522620 226 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 AC090695.1-201ENST00000561269 1222 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AADACP1-206ENST00000561502 1193 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AC010653.1-201ENST00000571108 881 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN3O15551 AL158211.4-201ENST00000606988 584 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AL049777.1-201ENST00000622740 518 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AP000676.4-201ENST00000624659 623 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AC099654.8-201ENST00000637757 681 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 FAM35BP-202ENST00000497389 3337 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN3O15551 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN3O15551 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN3O15551 GABRG2-229ENST00000641017 3628 ntBASIC3.03□□□□□ -1.92
CLDN3O15551 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN3O15551 AC091564.4-201ENST00000533934 2194 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
CLDN3O15551 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN3O15551 ASNSP3-201ENST00000451989 1306 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 MIR26A1-201ENST00000362205 77 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 RNA5SP139-201ENST00000364340 117 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 RNU6-413P-201ENST00000384115 107 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 AL138827.1-201ENST00000402666 306 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN3O15551 AC234781.2-201ENST00000426370 994 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 AL590383.1-201ENST00000428602 75 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 AL356867.1-201ENST00000429623 299 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 OR4K11P-201ENST00000431829 904 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 AC090774.1-201ENST00000435925 246 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 LSM1P1-201ENST00000438629 273 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 MTCO1P53-201ENST00000441633 699 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 GAPDHP27-201ENST00000447427 1020 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN3O15551 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN3O15551 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CLDN3O15551 SETP11-201ENST00000473027 690 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN3O15551 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN3O15551 AC079600.2-201ENST00000550076 130 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.02□□□□□ -1.93
CLDN3O15551 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN3O15551 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN3O15551 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.02□□□□□ -1.93
CLDN3O15551 DUXAP4-201ENST00000603046 613 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 AL138478.1-201ENST00000612252 832 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 AL357080.1-201ENST00000617394 239 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 MIR6130-201ENST00000619419 109 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.02□□□□□ -1.93
CLDN3O15551 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CLDN3O15551 AL355596.1-201ENST00000565399 3996 ntBASIC3.02□□□□□ -1.93
CLDN3O15551 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN3O15551 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN3O15551 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.01□□□□□ -1.93
CLDN3O15551 AL161431.1-201ENST00000618966 4205 ntBASIC3.01□□□□□ -1.93
CLDN3O15551 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CLDN3O15551 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms