Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RN7SL297P-201ENST00000483161 293 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.92□□□□□ -1.94
MSH4O15457 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH4O15457 AC114322.1-201ENST00000506771 926 ntBASIC2.92□□□□□ -1.94
MSH4O15457 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.92□□□□□ -1.94
MSH4O15457 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.92□□□□□ -1.94
MSH4O15457 RNY4P37-201ENST00000516225 96 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH4O15457 AP001804.3-201ENST00000525146 880 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AC022690.1-201ENST00000526681 550 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AC087276.1-201ENST00000529659 480 ntBASIC2.92□□□□□ -1.94
MSH4O15457 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MSH4O15457 AC005951.1-201ENST00000576706 485 ntBASIC2.92□□□□□ -1.94
MSH4O15457 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.92□□□□□ -1.94
MSH4O15457 DUXAP11-201ENST00000603858 526 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AC004853.1-201ENST00000604902 698 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AC012443.1-201ENST00000605605 231 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AC008962.1-201ENST00000605729 304 ntBASIC2.92□□□□□ -1.94
MSH4O15457 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.92□□□□□ -1.94
MSH4O15457 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.92□□□□□ -1.94
MSH4O15457 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
MSH4O15457 AL356473.1-201ENST00000406203 1408 ntBASIC2.92□□□□□ -1.94
MSH4O15457 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.92□□□□□ -1.94
MSH4O15457 RNU6-560P-201ENST00000364007 108 ntBASIC2.91□□□□□ -1.94
MSH4O15457 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
MSH4O15457 MIR135A2-201ENST00000384854 100 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AL031679.1-201ENST00000400616 525 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AL136372.1-201ENST00000403060 228 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AL136310.1-201ENST00000404926 654 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH4O15457 AC093151.1-201ENST00000427711 313 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AL390023.1-201ENST00000428836 262 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH4O15457 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH4O15457 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH4O15457 GAPDHP27-201ENST00000447427 1020 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AL031313.1-201ENST00000448435 256 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.91□□□□□ -1.94
MSH4O15457 RPL23AP11-201ENST00000475260 469 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AC126389.1-201ENST00000477436 290 ntBASIC2.91□□□□□ -1.94
MSH4O15457 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH4O15457 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH4O15457 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH4O15457 MTATP6P9-201ENST00000515039 680 ntBASIC2.91□□□□□ -1.94
MSH4O15457 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
MSH4O15457 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH4O15457 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.91□□□□□ -1.94
MSH4O15457 MIR4509-3-201ENST00000578671 94 ntBASIC2.91□□□□□ -1.94
MSH4O15457 OR4K8P-201ENST00000578842 1048 ntBASIC2.91□□□□□ -1.94
MSH4O15457 MIR4509-2-201ENST00000583920 94 ntBASIC2.91□□□□□ -1.94
MSH4O15457 VN1R78P-201ENST00000597393 564 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AL160237.3-201ENST00000604114 1013 ntBASIC2.91□□□□□ -1.94
MSH4O15457 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.91□□□□□ -1.94
MSH4O15457 MIR6817-201ENST00000615588 66 ntBASIC2.91□□□□□ -1.94
MSH4O15457 MIR4509-1-201ENST00000618224 94 ntBASIC2.91□□□□□ -1.94
MSH4O15457 AC010608.3-201ENST00000625048 527 ntBASIC2.91□□□□□ -1.94
MSH4O15457 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.91□□□□□ -1.94
MSH4O15457 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.91□□□□□ -1.94
MSH4O15457 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.94
MSH4O15457 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
MSH4O15457 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.9□□□□□ -1.94
MSH4O15457 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.9□□□□□ -1.95
MSH4O15457 U3.12-201ENST00000364498 214 ntBASIC2.9□□□□□ -1.95
MSH4O15457 RNU6-925P-201ENST00000384629 104 ntBASIC2.9□□□□□ -1.95
MSH4O15457 RNA5SP210-201ENST00000391034 120 ntBASIC2.9□□□□□ -1.95
MSH4O15457 HMGB1P17-201ENST00000403495 628 ntBASIC2.9□□□□□ -1.95
MSH4O15457 AL354719.1-201ENST00000406535 843 ntBASIC2.9□□□□□ -1.95
MSH4O15457 RNU4-22P-201ENST00000411058 166 ntBASIC2.9□□□□□ -1.95
MSH4O15457 RNA5SP344-201ENST00000411081 104 ntBASIC2.9□□□□□ -1.95
MSH4O15457 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.9□□□□□ -1.95
MSH4O15457 TIMM9P2-201ENST00000419324 266 ntBASIC2.9□□□□□ -1.95
MSH4O15457 BEND7P1-201ENST00000422058 457 ntBASIC2.9□□□□□ -1.95
MSH4O15457 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.9□□□□□ -1.95
MSH4O15457 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.9□□□□□ -1.95
MSH4O15457 MTCYBP45-201ENST00000435243 565 ntBASIC2.9□□□□□ -1.95
MSH4O15457 SDCBPP1-201ENST00000440192 890 ntBASIC2.9□□□□□ -1.95
MSH4O15457 OR10R1P-201ENST00000441524 1141 ntBASIC2.9□□□□□ -1.95
MSH4O15457 AL121871.1-201ENST00000443413 436 ntBASIC2.9□□□□□ -1.95
MSH4O15457 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.9□□□□□ -1.95
MSH4O15457 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.9□□□□□ -1.95
MSH4O15457 SRIP1-201ENST00000489235 288 ntBASIC2.9□□□□□ -1.95
MSH4O15457 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.9□□□□□ -1.95
MSH4O15457 RNA5SP76-201ENST00000516277 87 ntBASIC2.9□□□□□ -1.95
MSH4O15457 RNA5SP148-201ENST00000516527 94 ntBASIC2.9□□□□□ -1.95
MSH4O15457 ERHP1-201ENST00000523006 310 ntBASIC2.9□□□□□ -1.95
MSH4O15457 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
MSH4O15457 AC091057.3-201ENST00000602684 733 ntBASIC2.9□□□□□ -1.95
MSH4O15457 MTND3P19-201ENST00000603825 345 ntBASIC2.9□□□□□ -1.95
MSH4O15457 TUG1_1.1-201ENST00000610654 145 ntBASIC2.9□□□□□ -1.95
MSH4O15457 AC084035.1-201ENST00000634543 607 ntBASIC2.9□□□□□ -1.95
MSH4O15457 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
MSH4O15457 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.9□□□□□ -1.95
MSH4O15457 MTND5P7-201ENST00000413558 1798 ntBASIC2.89□□□□□ -1.95
MSH4O15457 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.89□□□□□ -1.95
MSH4O15457 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
MSH4O15457 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.89□□□□□ -1.95
MSH4O15457 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
MSH4O15457 RNU6-28P-201ENST00000362378 107 ntBASIC2.89□□□□□ -1.95
MSH4O15457 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.89□□□□□ -1.95
MSH4O15457 MIR493-201ENST00000385254 89 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 234.7 ms