Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 AC002076.2-201ENST00000617362 122 ntBASIC3.36□□□□□ -1.87
TO15178 AC112204.3-201ENST00000623822 332 ntBASIC3.36□□□□□ -1.87
TO15178 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.36□□□□□ -1.87
TO15178 AC010149.2-201ENST00000637608 315 ntBASIC3.36□□□□□ -1.87
TO15178 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TO15178 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TO15178 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TO15178 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TO15178 AC005832.2-201ENST00000538921 1430 ntBASIC3.36□□□□□ -1.87
TO15178 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TO15178 AL138713.1-201ENST00000624026 2130 ntBASIC3.35□□□□□ -1.87
TO15178 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
TO15178 DDX10P1-201ENST00000448545 1933 ntBASIC3.35□□□□□ -1.87
TO15178 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.35□□□□□ -1.87
TO15178 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TO15178 RNU6-223P-201ENST00000362830 107 ntBASIC3.35□□□□□ -1.87
TO15178 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.35□□□□□ -1.87
TO15178 RNU6-432P-201ENST00000384196 109 ntBASIC3.35□□□□□ -1.87
TO15178 MIR554-201ENST00000384874 96 ntBASIC3.35□□□□□ -1.87
TO15178 MIR134-201ENST00000385258 73 ntBASIC3.35□□□□□ -1.87
TO15178 CCNG1P1-201ENST00000406783 885 ntBASIC3.35□□□□□ -1.87
TO15178 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.35□□□□□ -1.87
TO15178 RAB9AP3-201ENST00000412737 573 ntBASIC3.35□□□□□ -1.87
TO15178 AL353777.1-201ENST00000425552 326 ntBASIC3.35□□□□□ -1.87
TO15178 AC018644.1-201ENST00000429934 551 ntBASIC3.35□□□□□ -1.87
TO15178 AC024082.2-201ENST00000434771 238 ntBASIC3.35□□□□□ -1.87
TO15178 AC090774.1-201ENST00000435925 246 ntBASIC3.35□□□□□ -1.87
TO15178 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TO15178 TAF9P1-201ENST00000445421 515 ntBASIC3.35□□□□□ -1.87
TO15178 ST13P20-201ENST00000447996 1065 ntBASIC3.35□□□□□ -1.87
TO15178 TPT1P14-201ENST00000448018 505 ntBASIC3.35□□□□□ -1.87
TO15178 RAB9AP1-201ENST00000449393 573 ntBASIC3.35□□□□□ -1.87
TO15178 TAF9P2-201ENST00000454958 515 ntBASIC3.35□□□□□ -1.87
TO15178 RPL21P8-201ENST00000465083 535 ntBASIC3.35□□□□□ -1.87
TO15178 RN7SL542P-201ENST00000467147 294 ntBASIC3.35□□□□□ -1.87
TO15178 AP002884.2-201ENST00000471647 395 ntBASIC3.35□□□□□ -1.87
TO15178 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.35□□□□□ -1.87
TO15178 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.35□□□□□ -1.87
TO15178 AC026784.1-201ENST00000507986 352 ntBASIC3.35□□□□□ -1.87
TO15178 RNU1-95P-201ENST00000516357 160 ntBASIC3.35□□□□□ -1.87
TO15178 RNU1-128P-201ENST00000516704 160 ntBASIC3.35□□□□□ -1.87
TO15178 AP002748.2-201ENST00000528671 348 ntBASIC3.35□□□□□ -1.87
TO15178 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.35□□□□□ -1.87
TO15178 AL133271.1-201ENST00000538229 291 ntBASIC3.35□□□□□ -1.87
TO15178 AC125611.2-201ENST00000551907 647 ntBASIC3.35□□□□□ -1.87
TO15178 ZNF519P3-201ENST00000557158 1032 ntBASIC3.35□□□□□ -1.87
TO15178 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.35□□□□□ -1.87
TO15178 BNIP3P8-201ENST00000597863 560 ntBASIC3.35□□□□□ -1.87
TO15178 AL358072.1-201ENST00000604156 575 ntBASIC3.35□□□□□ -1.87
TO15178 AL355472.4-201ENST00000610233 626 ntBASIC3.35□□□□□ -1.87
TO15178 AC138749.5-201ENST00000611461 208 ntBASIC3.35□□□□□ -1.87
TO15178 AC093838.1-201ENST00000613014 469 ntBASIC3.35□□□□□ -1.87
TO15178 AC116165.2-201ENST00000616705 206 ntBASIC3.35□□□□□ -1.87
TO15178 AC108479.2-201ENST00000617314 601 ntBASIC3.35□□□□□ -1.87
TO15178 AC009159.1-201ENST00000618386 642 ntBASIC3.35□□□□□ -1.87
TO15178 AC039056.2-201ENST00000622261 511 ntBASIC3.35□□□□□ -1.87
TO15178 AC034229.5-201ENST00000624258 185 ntBASIC3.35□□□□□ -1.87
TO15178 AL159972.1-201ENST00000625150 448 ntBASIC3.35□□□□□ -1.87
TO15178 AC019226.1-201ENST00000625666 515 ntBASIC3.35□□□□□ -1.87
TO15178 ZNF807-201ENST00000328088 1707 ntBASIC3.35□□□□□ -1.87
TO15178 CEP170P1-201ENST00000502249 4587 ntBASIC3.35□□□□□ -1.87
TO15178 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TO15178 AC009812.4-201ENST00000569134 1805 ntBASIC3.35□□□□□ -1.87
TO15178 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TO15178 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
TO15178 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TO15178 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TO15178 RNA5SP124-201ENST00000362739 110 ntBASIC3.34□□□□□ -1.87
TO15178 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
TO15178 MIR19A-201ENST00000384878 82 ntBASIC3.34□□□□□ -1.87
TO15178 FCF1P10-201ENST00000407590 479 ntBASIC3.34□□□□□ -1.87
TO15178 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.34□□□□□ -1.87
TO15178 RNU6-1077P-201ENST00000410506 102 ntBASIC3.34□□□□□ -1.87
TO15178 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 RPL21P32-201ENST00000419877 477 ntBASIC3.34□□□□□ -1.87
TO15178 RPL31P12-201ENST00000422587 358 ntBASIC3.34□□□□□ -1.87
TO15178 AC006989.1-201ENST00000427212 131 ntBASIC3.34□□□□□ -1.87
TO15178 MTATP6P4-201ENST00000427725 675 ntBASIC3.34□□□□□ -1.87
TO15178 RPL21P40-201ENST00000428586 483 ntBASIC3.34□□□□□ -1.87
TO15178 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 MTND1P28-201ENST00000435623 950 ntBASIC3.34□□□□□ -1.87
TO15178 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 AC122718.1-201ENST00000439448 744 ntBASIC3.34□□□□□ -1.87
TO15178 AC092641.1-201ENST00000440229 772 ntBASIC3.34□□□□□ -1.87
TO15178 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 AL049734.2-201ENST00000441066 616 ntBASIC3.34□□□□□ -1.87
TO15178 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 AL360221.1-201ENST00000445989 335 ntBASIC3.34□□□□□ -1.87
TO15178 PDSS1P2-201ENST00000449397 678 ntBASIC3.34□□□□□ -1.87
TO15178 AC140076.1-201ENST00000449897 361 ntBASIC3.34□□□□□ -1.87
TO15178 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 FAM133DP-201ENST00000464802 691 ntBASIC3.34□□□□□ -1.87
TO15178 FTH1P2-201ENST00000466086 412 ntBASIC3.34□□□□□ -1.87
TO15178 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.34□□□□□ -1.87
TO15178 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.34□□□□□ -1.87
TO15178 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.34□□□□□ -1.87
TO15178 AC010265.1-201ENST00000513509 211 ntBASIC3.34□□□□□ -1.87
TO15178 RNU1-45P-201ENST00000517191 141 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms