Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.47□□□□□ -2.01
DFFAO00273 MIR3609-201ENST00000582661 80 ntBASIC2.47□□□□□ -2.01
DFFAO00273 U73023.1-201ENST00000603134 700 ntBASIC2.47□□□□□ -2.01
DFFAO00273 MIR6852-201ENST00000621699 66 ntBASIC2.47□□□□□ -2.01
DFFAO00273 AC093875.1-201ENST00000623688 504 ntBASIC2.47□□□□□ -2.01
DFFAO00273 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
DFFAO00273 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.46□□□□□ -2.01
DFFAO00273 AC008568.2-201ENST00000623862 2313 ntBASIC2.46□□□□□ -2.02
DFFAO00273 RNU5B-1-201ENST00000363286 116 ntBASIC2.46□□□□□ -2.02
DFFAO00273 UBE2V1P2-201ENST00000397758 440 ntBASIC2.46□□□□□ -2.02
DFFAO00273 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AL356320.2-201ENST00000417263 507 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC009963.1-201ENST00000417265 157 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.46□□□□□ -2.02
DFFAO00273 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.46□□□□□ -2.02
DFFAO00273 NANOGP5-201ENST00000424456 877 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC234781.2-201ENST00000426370 994 ntBASIC2.46□□□□□ -2.02
DFFAO00273 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
DFFAO00273 AC024082.2-201ENST00000434771 238 ntBASIC2.46□□□□□ -2.02
DFFAO00273 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.46□□□□□ -2.02
DFFAO00273 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.46□□□□□ -2.02
DFFAO00273 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.46□□□□□ -2.02
DFFAO00273 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.46□□□□□ -2.02
DFFAO00273 AC092757.1-201ENST00000467293 467 ntBASIC2.46□□□□□ -2.02
DFFAO00273 RPS27P27-201ENST00000498779 255 ntBASIC2.46□□□□□ -2.02
DFFAO00273 COX7A2P2-201ENST00000505291 250 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC069306.1-201ENST00000507006 843 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC026436.1-201ENST00000510537 270 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.46□□□□□ -2.02
DFFAO00273 CASP1P1-201ENST00000526345 212 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AP001646.1-201ENST00000527936 915 ntBASIC2.46□□□□□ -2.02
DFFAO00273 OR5BN1P-201ENST00000532955 829 ntBASIC2.46□□□□□ -2.02
DFFAO00273 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
DFFAO00273 AC044913.1-201ENST00000557200 430 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.46□□□□□ -2.02
DFFAO00273 MIR4672-201ENST00000583126 81 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.46□□□□□ -2.02
DFFAO00273 AC015688.2-201ENST00000584523 262 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
DFFAO00273 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.46□□□□□ -2.02
DFFAO00273 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.46□□□□□ -2.02
DFFAO00273 BNIP3P24-201ENST00000593398 557 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC005776.1-201ENST00000603164 290 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AL031176.1-201ENST00000604554 466 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AP001521.1-201ENST00000609150 300 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AL161734.1-201ENST00000609720 557 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC078880.5-201ENST00000617845 421 ntBASIC2.46□□□□□ -2.02
DFFAO00273 AC243829.7-201ENST00000633081 225 ntBASIC2.46□□□□□ -2.02
DFFAO00273 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
DFFAO00273 AC026241.1-201ENST00000517873 2142 ntBASIC2.45□□□□□ -2.02
DFFAO00273 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
DFFAO00273 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
DFFAO00273 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.45□□□□□ -2.02
DFFAO00273 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
DFFAO00273 DEFB108F-201ENST00000344638 222 ntBASIC2.45□□□□□ -2.02
DFFAO00273 Y_RNA.111-201ENST00000363248 100 ntBASIC2.45□□□□□ -2.02
DFFAO00273 RNU1-51P-201ENST00000365345 176 ntBASIC2.45□□□□□ -2.02
DFFAO00273 U8.8-201ENST00000365399 135 ntBASIC2.45□□□□□ -2.02
DFFAO00273 RNU6-1197P-201ENST00000391183 107 ntBASIC2.45□□□□□ -2.02
DFFAO00273 RNA5SP181-201ENST00000410246 98 ntBASIC2.45□□□□□ -2.02
DFFAO00273 RNU2-25P-201ENST00000411041 191 ntBASIC2.45□□□□□ -2.02
DFFAO00273 AL513477.1-202ENST00000417061 214 ntBASIC2.45□□□□□ -2.02
DFFAO00273 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.45□□□□□ -2.02
DFFAO00273 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.45□□□□□ -2.02
DFFAO00273 AL121871.1-201ENST00000443413 436 ntBASIC2.45□□□□□ -2.02
DFFAO00273 MRPL42P4-201ENST00000453267 443 ntBASIC2.45□□□□□ -2.02
DFFAO00273 AP000852.1-201ENST00000472460 573 ntBASIC2.45□□□□□ -2.02
DFFAO00273 RPL36AP51-201ENST00000487216 318 ntBASIC2.45□□□□□ -2.02
DFFAO00273 AC234781.5-201ENST00000508429 271 ntBASIC2.45□□□□□ -2.02
DFFAO00273 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.45□□□□□ -2.02
DFFAO00273 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.45□□□□□ -2.02
DFFAO00273 AC119751.5-201ENST00000514077 770 ntBASIC2.45□□□□□ -2.02
DFFAO00273 snoZ278.1-201ENST00000517059 112 ntBASIC2.45□□□□□ -2.02
DFFAO00273 DEFB108D-201ENST00000527787 222 ntBASIC2.45□□□□□ -2.02
DFFAO00273 AC087276.1-201ENST00000529659 480 ntBASIC2.45□□□□□ -2.02
DFFAO00273 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.45□□□□□ -2.02
DFFAO00273 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.45□□□□□ -2.02
DFFAO00273 MIR3921-201ENST00000577308 85 ntBASIC2.45□□□□□ -2.02
DFFAO00273 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.45□□□□□ -2.02
DFFAO00273 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.45□□□□□ -2.02
DFFAO00273 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.45□□□□□ -2.02
DFFAO00273 U6.101-201ENST00000637707 76 ntBASIC2.45□□□□□ -2.02
DFFAO00273 AL512283.1-201ENST00000606756 1384 ntBASIC2.45□□□□□ -2.02
DFFAO00273 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
DFFAO00273 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
DFFAO00273 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
DFFAO00273 MIR21-201ENST00000362134 72 ntBASIC2.44□□□□□ -2.02
DFFAO00273 RNA5SP393-201ENST00000363423 117 ntBASIC2.44□□□□□ -2.02
DFFAO00273 SNORD114-30-201ENST00000364448 72 ntBASIC2.44□□□□□ -2.02
DFFAO00273 RNU2-43P-201ENST00000410306 190 ntBASIC2.44□□□□□ -2.02
DFFAO00273 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.44□□□□□ -2.02
DFFAO00273 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.44□□□□□ -2.02
DFFAO00273 LUZP4P1-201ENST00000415420 344 ntBASIC2.44□□□□□ -2.02
DFFAO00273 BEND7P1-201ENST00000422058 457 ntBASIC2.44□□□□□ -2.02
DFFAO00273 AC092573.2-201ENST00000434546 243 ntBASIC2.44□□□□□ -2.02
DFFAO00273 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.44□□□□□ -2.02
DFFAO00273 AL513328.1-201ENST00000446460 224 ntBASIC2.44□□□□□ -2.02
DFFAO00273 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
DFFAO00273 RPL31P60-201ENST00000478450 367 ntBASIC2.44□□□□□ -2.02
DFFAO00273 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms