Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
CGB1A6NKQ9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CGB1A6NKQ9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CGB1A6NKQ9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CGB1A6NKQ9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CGB1A6NKQ9 AC018529.3-201ENST00000624212 2254 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 Y_RNA.31-201ENST00000362574 102 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 RNA5SP151-201ENST00000365632 117 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 RNU6-1106P-201ENST00000390845 107 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AL109941.1-201ENST00000401925 229 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 RPS4XP9-201ENST00000405151 780 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 MIR548F5-201ENST00000408421 86 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 RN7SKP158-201ENST00000410453 326 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 Y_RNA.605-201ENST00000410577 105 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 RPL37P10-201ENST00000412884 288 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AL591848.1-201ENST00000413092 322 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 RPL21P112-201ENST00000434403 463 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 MTATP6P16-201ENST00000434543 526 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 PRPS1P1-201ENST00000445305 876 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC104308.1-201ENST00000454621 333 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC091685.2-201ENST00000454924 864 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 SNRPGP5-201ENST00000456003 220 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC116562.3-201ENST00000506136 177 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC017037.1-201ENST00000508460 471 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 SMURF2P1-201ENST00000514992 481 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 RNA5SP503-201ENST00000517047 117 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 IGLV2-28-201ENST00000520681 304 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 COPS8P3-201ENST00000526024 482 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC068587.5-201ENST00000528506 175 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AP000889.2-201ENST00000532684 490 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 APOOP3-201ENST00000536787 586 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AP001880.2-201ENST00000538233 448 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AL390726.5-202ENST00000564800 256 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 MIR4775-201ENST00000581168 75 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 MIR4424-201ENST00000585257 86 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC011487.3-201ENST00000593607 453 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 VN1R107P-201ENST00000601784 209 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC103710.2-201ENST00000609912 942 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 MTND4P14-201ENST00000435799 1354 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 MTND5P10-201ENST00000603719 1809 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 TAB3P1-202ENST00000452645 1634 ntBASIC3.7□□□□□ -1.82
CGB1A6NKQ9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.7□□□□□ -1.82
CGB1A6NKQ9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 RNU6-641P-201ENST00000384006 107 ntBASIC3.69□□□□□ -1.82
CGB1A6NKQ9 MIR195-201ENST00000385194 87 ntBASIC3.69□□□□□ -1.82
CGB1A6NKQ9 SPTLC1P2-201ENST00000407089 121 ntBASIC3.69□□□□□ -1.82
CGB1A6NKQ9 RNA5SP113-201ENST00000410486 84 ntBASIC3.69□□□□□ -1.82
CGB1A6NKQ9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 AL391219.1-201ENST00000422570 483 ntBASIC3.69□□□□□ -1.82
CGB1A6NKQ9 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 RPL7L1P10-201ENST00000427790 463 ntBASIC3.69□□□□□ -1.82
CGB1A6NKQ9 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 NRBF2P3-201ENST00000432731 865 ntBASIC3.69□□□□□ -1.82
CGB1A6NKQ9 FTH1P1-201ENST00000437933 532 ntBASIC3.69□□□□□ -1.82
CGB1A6NKQ9 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.69□□□□□ -1.82
CGB1A6NKQ9 AL137792.2-201ENST00000443484 235 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms