Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC093424.1-201ENST00000604999 338 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AL139344.1-201ENST00000605228 195 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AL136981.2-201ENST00000617319 734 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AL607023.1-201ENST00000620045 248 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC010338.1-201ENST00000621823 717 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC004009.2-201ENST00000623016 728 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC231657.1-201ENST00000624313 397 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 AC017037.3-201ENST00000625016 472 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 MIR6733-201ENST00000635723 61 ntBASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.24□□□□□ -2.05
TRAV40A0A0B4J280 GABPAP-201ENST00000419271 1356 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 MIR449A-201ENST00000362113 91 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 MIR26A1-201ENST00000362205 77 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-289P-201ENST00000364093 107 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 RNU4-28P-201ENST00000364739 141 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-1122P-201ENST00000384449 107 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 MIR9-1-201ENST00000385198 89 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 ANAPC10P1-201ENST00000395991 556 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 XKRYP1-201ENST00000423438 492 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 XKRYP2-201ENST00000432915 492 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 MTCYBP34-201ENST00000439552 670 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 OR6C5P-201ENST00000452388 923 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 ARPC3P2-201ENST00000457786 533 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC003982.1-202ENST00000469928 248 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 RN7SL499P-201ENST00000481141 276 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC090453.1-201ENST00000495560 436 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 KLRA1P-201ENST00000503499 986 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC109445.1-201ENST00000512356 383 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 RPL12P22-201ENST00000519073 490 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 LRRC34P1-201ENST00000542742 915 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC007954.1-201ENST00000554198 494 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 OR4K8P-201ENST00000578842 1048 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC090616.5-202ENST00000582111 297 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC083760.1-201ENST00000589621 670 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 BNIP3P24-201ENST00000593398 557 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC025588.2-201ENST00000604851 466 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 Z99289.3-201ENST00000605586 594 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AL390208.1-201ENST00000605885 644 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC107871.2-201ENST00000612894 502 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 U73479.1-201ENST00000618062 168 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AL353748.2-201ENST00000622148 471 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC092608.2-201ENST00000624427 218 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 IGHVIII-44-202ENST00000636235 289 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 LRRC77P-213ENST00000637727 880 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 AC006927.4-201ENST00000639187 543 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 MTND4P34-201ENST00000572715 1371 ntBASIC2.23□□□□□ -2.05
TRAV40A0A0B4J280 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 FAM35CP-201ENST00000554755 2470 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 FAM133CP-201ENST00000332869 704 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 RNU6-433P-201ENST00000363216 104 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 U8.9-201ENST00000365667 134 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 MIR181A2-201ENST00000384863 110 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 USP9YP33-201ENST00000412220 421 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 TPMTP2-201ENST00000414372 726 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 RPS24P7-201ENST00000416921 246 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 SSXP9-201ENST00000417503 292 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 BX119904.4-201ENST00000424402 301 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 ZYG11AP1-201ENST00000430329 837 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 USP9YP35-201ENST00000435696 412 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 MTND5P14-201ENST00000441481 1267 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AP000936.2-201ENST00000447151 681 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AL353691.1-201ENST00000451332 387 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 AC097493.1-201ENST00000463958 372 ntBASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.22□□□□□ -2.05
TRAV40A0A0B4J280 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms