Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 RNF138P1-201ENST00000502765 546 ntBASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 RN7SKP277-201ENST00000516895 283 ntBASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 LARP7P2-201ENST00000575306 125 ntBASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 MTND1P15-201ENST00000579262 949 ntBASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 MIR4637-201ENST00000582405 84 ntBASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 AC006023.1-201ENST00000603944 259 ntBASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 AL139286.2-201ENST00000606838 396 ntBASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PCDHAC2Q9Y5I4 AP002907.1-201ENST00000606361 1430 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 MTND4P16-201ENST00000466108 1367 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 RNU6-348P-201ENST00000384386 107 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 ARF4P3-201ENST00000397387 509 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 RNU6-648P-201ENST00000410190 107 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 RPS7P13-201ENST00000413955 498 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC083875.1-201ENST00000419509 405 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AL035410.1-201ENST00000427409 427 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 ZYG11AP1-201ENST00000430329 837 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 UBE2FP3-201ENST00000436366 524 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 USP9YP7-201ENST00000436723 430 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 BX276092.4-201ENST00000452056 248 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 USP9YP32-201ENST00000452432 430 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 MTCYBP1-201ENST00000454315 1119 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 MEMO1P3-201ENST00000459811 302 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 RPS15AP17-201ENST00000470598 390 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC116337.2-201ENST00000477662 156 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC096751.1-202ENST00000502691 1067 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC114981.1-201ENST00000503897 678 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC026801.2-201ENST00000515352 425 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 OR4A45P-201ENST00000529954 901 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC092470.1-201ENST00000546187 132 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC025588.3-201ENST00000604182 274 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC107214.2-201ENST00000608204 634 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AC107294.1-201ENST00000609524 467 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 AL355073.2-201ENST00000612106 557 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 Z99129.1-201ENST00000612510 255 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 SNORD39.4-201ENST00000620099 78 ntBASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.78□□□□□ -1.8
PCDHAC2Q9Y5I4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PCDHAC2Q9Y5I4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 Y_RNA.97-201ENST00000363094 102 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 RNU6-777P-201ENST00000364265 104 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 RNVU1-3-201ENST00000364313 161 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 RNU6-517P-201ENST00000384362 110 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 Y_RNA.516-201ENST00000384541 124 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 Y_RNA.517-201ENST00000384551 106 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 MIR124-3-201ENST00000384866 87 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 UBE2V1P10-201ENST00000414685 269 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 RPS12P23-201ENST00000419579 400 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 OR51AB1P-201ENST00000429046 620 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 PSMA2P3-201ENST00000429685 675 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 AL365184.2-201ENST00000431139 435 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 MTND1P4-201ENST00000435196 415 ntBASIC3.77□□□□□ -1.81
PCDHAC2Q9Y5I4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms