Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 RN7SL184P-201ENST00000488308 297 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 RFPL4AP5-201ENST00000514977 504 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AK6P2-201ENST00000549020 471 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 RPL21P9-201ENST00000556149 474 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 MIR4423-201ENST00000580922 80 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AC008814.1-201ENST00000603797 406 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AC010332.2-201ENST00000613083 1904 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AL731532.2-201ENST00000623542 1953 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 AC025470.1-201ENST00000510053 2032 ntBASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PCDHB3Q9Y5E6 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 MIR410-201ENST00000362222 80 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 RNU6-222P-201ENST00000362438 107 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 Y_RNA.71-201ENST00000362892 104 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC019155.1-201ENST00000382242 574 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SNORD116-14-201ENST00000383894 92 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SNORD116-17-201ENST00000383929 92 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 Y_RNA.446-201ENST00000384178 104 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SNORD116-15-201ENST00000384445 92 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SNORD116-20-201ENST00000384529 92 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SNORD116-19-201ENST00000384729 92 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SNORA40-201ENST00000388090 126 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SNORA46.1-201ENST00000391069 153 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 RN7SKP17-201ENST00000411242 351 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC245096.1-201ENST00000413104 546 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AL391219.1-201ENST00000422570 483 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AL451062.2-201ENST00000427515 271 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 RPL7L1P9-201ENST00000431298 745 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AL163193.1-201ENST00000444895 788 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SNRPCP3-201ENST00000474888 476 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC074255.1-201ENST00000511259 501 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SNORD46.2-201ENST00000516021 102 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 RNU6-971P-201ENST00000516920 106 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 RNA5SP170-201ENST00000517150 101 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 ATP5F1P5-201ENST00000526403 760 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC090022.1-201ENST00000546569 311 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 Y_RNA.778-201ENST00000620203 90 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC099506.2-201ENST00000623074 221 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 Z99571.1-201ENST00000636677 394 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AC000095.2-202ENST00000637415 154 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 RAD17P1-201ENST00000418130 2042 ntBASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB3Q9Y5E6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AC232271.1-201ENST00000602455 2715 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 RBMY1HP-201ENST00000382759 1389 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AC022325.1-201ENST00000502748 2199 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 RNU6-151P-201ENST00000364158 107 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 RNU4-84P-201ENST00000364200 139 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 SNORA43.1-201ENST00000364863 140 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 RNA5SP284-201ENST00000384547 118 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 Y_RNA.571-201ENST00000384753 98 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 RNU6-821P-201ENST00000390995 107 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 RPL23AP26-201ENST00000412728 464 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AC024067.1-201ENST00000426199 223 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 RPS20P1-201ENST00000434853 354 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 KRT8P51-201ENST00000438938 274 ntBASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB3Q9Y5E6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms