Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL355812.1-201ENST00000603215 216 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC012603.1-201ENST00000606424 528 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AL357078.3-201ENST00000607528 618 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AL732618.1-201ENST00000623251 301 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 MIR4496-201ENST00000635896 61 ntBASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX2IPQ9Y2D8 AP004289.2-201ENST00000444413 1457 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 MTND5P33-201ENST00000571250 1450 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 U3.20-201ENST00000390909 217 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 CCNG1P1-201ENST00000406783 885 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 EZH2P1-201ENST00000431167 291 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AL049734.2-201ENST00000441066 616 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC132479.1-201ENST00000449160 144 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 RPS4XP10-201ENST00000465034 731 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 PTP4A1P6-201ENST00000531034 478 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC007363.1-201ENST00000604736 620 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC091167.4-201ENST00000605079 184 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AP003117.2-201ENST00000606010 545 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 MIR98-201ENST00000606724 119 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC103710.3-201ENST00000608157 948 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC012531.5-201ENST00000611375 151 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC079597.1-201ENST00000624306 508 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 MAPK10-373ENST00000641983 6772 ntBASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SSX2IPQ9Y2D8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 RAB9AP3-201ENST00000412737 573 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 RPL30P16-201ENST00000419341 429 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 MTCO2P11-201ENST00000431069 680 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC104850.1-201ENST00000435940 476 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 MTCO3P18-201ENST00000440206 761 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AL356535.1-201ENST00000440335 398 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC112653.1-201ENST00000443851 386 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 RAB9AP1-201ENST00000449393 573 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 MTND2P24-201ENST00000453434 806 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 MTND1P12-201ENST00000455231 147 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 HMGN2P7-201ENST00000456186 273 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 RPS20P24-201ENST00000457473 361 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 RPL9P32-201ENST00000464118 620 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC021382.1-201ENST00000483523 359 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC023194.1-201ENST00000493084 308 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 OR5H5P-201ENST00000503164 928 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 COX7A2P2-201ENST00000505291 250 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 ARL4AP2-201ENST00000507378 601 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AP003034.1-201ENST00000534621 422 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AL157687.1-201ENST00000554853 619 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC107954.1-201ENST00000565906 727 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AL356432.3-201ENST00000568952 465 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 MIR3118-1-201ENST00000581787 76 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC008277.2-201ENST00000605196 797 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AL365503.1-201ENST00000605247 905 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AL121772.2-201ENST00000614331 297 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC006338.1-201ENST00000618453 749 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 FP236240.3-201ENST00000623061 327 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 AC091905.1-201ENST00000624400 311 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 LRRC77P-213ENST00000637727 880 ntBASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSX2IPQ9Y2D8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSX2IPQ9Y2D8 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSX2IPQ9Y2D8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
SSX2IPQ9Y2D8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SSX2IPQ9Y2D8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms