Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AC020658.4-201ENST00000613987 684 ntBASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 AC097460.3-201ENST00000623099 442 ntBASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 AL118508.4-201ENST00000624142 1176 ntBASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 AL512506.2-201ENST00000624472 458 ntBASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 AC080188.3-201ENST00000624842 748 ntBASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 HPVC1-201ENST00000629899 1198 ntBASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 AC087359.1-201ENST00000508335 1740 ntBASIC1.8□□□□□ -2.12
HHLA3Q9XRX5 AC010680.1-201ENST00000590024 3590 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 RNU6-270P-201ENST00000364131 105 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 MIR217-201ENST00000384817 110 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 MIR27B-201ENST00000385129 97 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 NDUFB4P4-201ENST00000404822 243 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AL355615.1-201ENST00000406187 641 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 OR4K6P-201ENST00000416478 897 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 MTND1P23-201ENST00000416931 372 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AL031659.1-201ENST00000447075 539 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 COX6CP18-201ENST00000448769 222 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 OR52A4P-202ENST00000481634 799 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 RN7SL432P-201ENST00000484057 298 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC023424.2-201ENST00000493479 777 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC091860.1-201ENST00000505723 432 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC114322.1-201ENST00000506771 926 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 RNA5SP356-201ENST00000515972 94 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 RNU6-798P-201ENST00000516912 103 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 SNORA48.10-201ENST00000516965 160 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 CKS1BP7-201ENST00000522230 235 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC243972.3-201ENST00000539655 198 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC007115.1-201ENST00000546853 234 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 ZNF971P-201ENST00000562068 1249 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 MIR4319-201ENST00000577285 85 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC015688.2-201ENST00000584523 262 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC013444.2-201ENST00000603317 787 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AP002906.1-201ENST00000603405 233 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 MIR8084-201ENST00000614105 89 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC034102.8-201ENST00000615146 484 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AL445493.3-201ENST00000619568 477 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC079597.1-201ENST00000624306 508 ntBASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
HHLA3Q9XRX5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC008568.2-201ENST00000623862 2313 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 RNU6-198P-201ENST00000384258 104 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 MIR34A-201ENST00000385130 110 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AL139039.1-201ENST00000401900 692 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 BX664727.1-201ENST00000416024 466 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AL121882.1-201ENST00000422893 417 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 RPL27AP8-201ENST00000424277 446 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC234781.2-201ENST00000426370 994 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AL365496.1-201ENST00000426885 215 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 Z93242.1-201ENST00000427102 353 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC009414.1-201ENST00000427200 443 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AL500527.1-201ENST00000448532 255 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 snoU13.28-201ENST00000459235 104 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 RPL32P14-201ENST00000463196 378 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC104164.3-201ENST00000467363 1258 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC004924.1-201ENST00000480160 781 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 RNU6-362P-201ENST00000516736 90 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC087808.1-201ENST00000520501 361 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 CR383656.7-201ENST00000548164 174 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC078814.3-201ENST00000553036 491 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 AC090888.1-201ENST00000561335 1141 ntBASIC1.78□□□□□ -2.12
HHLA3Q9XRX5 OR4K8P-201ENST00000578842 1048 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms