Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 RAC1P7-201ENST00000445367 377 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 RPS17P13-201ENST00000448974 407 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 RPL36AP13-201ENST00000457490 317 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AC020893.1-201ENST00000502452 580 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AC009646.1-201ENST00000510455 318 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 IGKV2-38-201ENST00000517443 247 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AC022616.3-201ENST00000523940 148 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AP003034.1-201ENST00000534621 422 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 OR4T1P-201ENST00000554933 911 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 SNORA59B-202ENST00000578183 701 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AC069200.1-201ENST00000609511 323 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 FAM27D1-201ENST00000612308 341 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AL133173.2-201ENST00000614270 90 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AC084757.4-201ENST00000616350 526 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AL159972.1-201ENST00000625150 448 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 MIR3688-2-201ENST00000636963 87 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 AC244517.1-201ENST00000606030 2086 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 RLIMP1-201ENST00000339626 1680 ntBASIC3.94□□□□□ -1.78
VPS4AQ9UN37 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VPS4AQ9UN37 Y_RNA.1-201ENST00000352915 104 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 Y_RNA.9-201ENST00000362354 101 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 RNA5SP322-201ENST00000363617 119 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 RNY4P14-201ENST00000363656 96 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 RNU6-263P-201ENST00000363811 107 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 RNA5SP130-201ENST00000364431 114 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 Y_RNA.450-201ENST00000384198 113 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC073464.1-201ENST00000429823 534 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 MTND1P2-201ENST00000430604 821 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 MTND4LP10-201ENST00000435146 291 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC093156.1-201ENST00000440382 670 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 Z99127.3-201ENST00000448158 395 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AL133547.1-201ENST00000448546 220 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 PRSS3P4-201ENST00000453323 162 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 MTND2P24-201ENST00000453434 806 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 FTH1P21-201ENST00000512179 511 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC010493.1-201ENST00000513479 292 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 RNU6-718P-201ENST00000516166 105 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 RNA5SP49-201ENST00000516450 115 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 RNA5SP519-201ENST00000516480 119 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 OR5AQ1P-201ENST00000527596 927 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 CR383656.7-201ENST00000548164 174 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AL133241.1-201ENST00000556832 487 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 RN7SL600P-201ENST00000581811 299 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AP001429.1-201ENST00000602568 530 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AL606490.9-201ENST00000603331 271 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC112230.1-201ENST00000604342 547 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AL590282.1-201ENST00000610379 1136 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC245517.5-201ENST00000611529 162 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AC090970.3-201ENST00000612566 866 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 AL645937.1-201ENST00000641739 1652 ntBASIC3.93□□□□□ -1.78
VPS4AQ9UN37 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VPS4AQ9UN37 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 RNU5A-8P-201ENST00000364102 114 ntBASIC3.92□□□□□ -1.78
VPS4AQ9UN37 Y_RNA.256-201ENST00000364594 104 ntBASIC3.92□□□□□ -1.78
VPS4AQ9UN37 RNY4P16-201ENST00000364768 94 ntBASIC3.92□□□□□ -1.78
VPS4AQ9UN37 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.92□□□□□ -1.78
VPS4AQ9UN37 RNU1-89P-201ENST00000384592 164 ntBASIC3.92□□□□□ -1.78
VPS4AQ9UN37 RNU6-754P-201ENST00000391166 107 ntBASIC3.92□□□□□ -1.78
VPS4AQ9UN37 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.92□□□□□ -1.78
VPS4AQ9UN37 AL583834.1-201ENST00000406943 343 ntBASIC3.92□□□□□ -1.78
VPS4AQ9UN37 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms