Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 UBA52P6-201ENST00000399822 382 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 RNU6-272P-201ENST00000411028 104 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 BX295541.1-201ENST00000417774 250 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC017083.1-201ENST00000428093 483 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 CBWD4P-201ENST00000445695 655 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 MTCO3P10-201ENST00000455912 772 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC023598.1-201ENST00000472521 361 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC025518.1-201ENST00000479856 347 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC034159.1-201ENST00000513885 583 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 HIGD1AP6-201ENST00000521833 279 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC025627.2-201ENST00000576220 160 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 Z84480.1-201ENST00000605131 311 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC084781.2-201ENST00000615568 161 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC139792.3-201ENST00000623525 224 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC091903.1-201ENST00000624322 454 ntBASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
COL17A1Q9UMD9 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC025125.1-201ENST00000624743 1922 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 Y_RNA.557-201ENST00000384680 107 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 RNU6-33P-201ENST00000384793 107 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 SOD2P1-201ENST00000396543 562 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AL359704.1-201ENST00000411586 781 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 NAP1L1P2-201ENST00000414182 1089 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 RAC1P6-201ENST00000423911 575 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC002486.1-201ENST00000435098 391 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 HMGN2P26-201ENST00000463169 339 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 MRPS17P3-201ENST00000465453 385 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 POU5F1P7-201ENST00000508759 541 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 SNORA48.10-201ENST00000516965 160 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AP002404.1-201ENST00000532005 451 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 CYCSP2-201ENST00000558168 301 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC005668.1-201ENST00000571142 476 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC016727.2-201ENST00000603988 621 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC007938.3-201ENST00000604965 623 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC103710.4-201ENST00000609301 899 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AL356274.1-201ENST00000617064 410 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC022418.1-201ENST00000624118 445 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 FARSBP1-201ENST00000435808 1778 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 RNF6P1-201ENST00000444889 1784 ntBASIC5.94□□□□□ -1.46
COL17A1Q9UMD9 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 Y_RNA.28-201ENST00000362554 111 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 RNU6-451P-201ENST00000362921 107 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 RNA5SP126-201ENST00000365092 109 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 Y_RNA.395-201ENST00000383945 109 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AL139095.1-201ENST00000404326 391 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 RPL7P10-201ENST00000417407 739 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 MTCO2P27-201ENST00000420740 428 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 MTCO3P46-201ENST00000425787 232 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 MTCO3P20-201ENST00000454926 688 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 RPL23AP71-201ENST00000470966 469 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 RPS27P23-201ENST00000487608 251 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 RPL29P14-201ENST00000495837 428 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC026784.1-201ENST00000507986 352 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC105417.1-201ENST00000514691 285 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 RNU7-143P-201ENST00000516781 65 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 MIR5697-201ENST00000578045 78 ntBASIC5.93□□□□□ -1.46
COL17A1Q9UMD9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms