Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PACSIN3Q9UKS6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.13□□□□□ -1.75
PACSIN3Q9UKS6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 MTND5P33-201ENST00000571250 1450 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 Y_RNA.373-201ENST00000365600 103 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 RNU6-441P-201ENST00000384545 106 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 RPL7P60-201ENST00000397636 735 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC012065.2-201ENST00000421295 375 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 BEND7P1-201ENST00000422058 457 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 ERLEC1P1-201ENST00000433806 578 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AL356276.2-201ENST00000435919 558 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AL590639.1-201ENST00000456484 337 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 RPS4XP10-201ENST00000465034 731 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 RN7SL385P-201ENST00000468873 276 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 PABPC1P3-201ENST00000469174 459 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 VN1R17P-201ENST00000472048 1090 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC017037.1-201ENST00000508460 471 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 KLHL2P1-201ENST00000508691 521 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC021146.1-201ENST00000511202 716 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC114797.1-201ENST00000514003 728 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 Y_RNA.665-201ENST00000516177 98 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AP001781.1-201ENST00000530977 207 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AP001330.4-201ENST00000604350 154 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC090425.1-201ENST00000610007 140 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 uc_338.15-201ENST00000615470 191 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AP005019.3-201ENST00000620418 560 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC009318.4-201ENST00000620496 486 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC008785.1-201ENST00000624475 456 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 AC092447.10-201ENST00000620607 1652 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 MFSD8-242ENST00000641690 4199 ntBASIC4.12□□□□□ -1.75
PACSIN3Q9UKS6 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AP001486.2-201ENST00000561652 5113 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AC007823.1-201ENST00000569932 1566 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AC134882.1-201ENST00000603738 1676 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 RNU6-1309P-201ENST00000363305 108 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 Y_RNA.301-201ENST00000364990 103 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 RNU6-1297P-201ENST00000384415 104 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 SNORA37-201ENST00000384504 129 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 MIR649-201ENST00000384843 97 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 MT-TR-201ENST00000387439 65 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 SNORD37.1-201ENST00000390968 65 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AL356421.1-201ENST00000403255 413 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 RNU6-603P-201ENST00000411403 107 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AL139095.3-201ENST00000419672 1203 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AC009965.2-201ENST00000425328 970 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AL358176.2-201ENST00000425769 204 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 HSPE1P28-201ENST00000443139 211 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AC079781.2-201ENST00000446424 169 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AP1S2P1-201ENST00000457344 379 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 GMFBP1-201ENST00000467831 427 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 HSPD1P15-201ENST00000505573 1122 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 RNU6-410P-201ENST00000517006 107 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AP000907.2-201ENST00000530827 353 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 MIR4277-201ENST00000578298 84 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 MIR3146-201ENST00000580367 79 ntBASIC4.11□□□□□ -1.75
PACSIN3Q9UKS6 MIR3668-201ENST00000582138 75 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms