Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AL049779.4-201ENST00000604500 156 ntBASIC1.47□□□□□ -2.17
CHD7Q9P2D1 AL596028.1-201ENST00000326971 197 ntBASIC1.47□□□□□ -2.17
CHD7Q9P2D1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.47□□□□□ -2.17
CHD7Q9P2D1 AC023128.2-201ENST00000420880 1223 ntBASIC1.47□□□□□ -2.17
CHD7Q9P2D1 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.47□□□□□ -2.17
CHD7Q9P2D1 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.47□□□□□ -2.17
CHD7Q9P2D1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.47□□□□□ -2.17
CHD7Q9P2D1 AC138649.5-201ENST00000637456 137 ntBASIC1.47□□□□□ -2.17
CHD7Q9P2D1 AC000367.1-201ENST00000452711 1766 ntBASIC1.47□□□□□ -2.17
CHD7Q9P2D1 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC1.46□□□□□ -2.18
CHD7Q9P2D1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.46□□□□□ -2.18
CHD7Q9P2D1 RNU6-461P-201ENST00000364195 107 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 RSL24D1P2-201ENST00000445584 366 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 snoU13.3-201ENST00000459441 104 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.46□□□□□ -2.18
CHD7Q9P2D1 MIR3935-201ENST00000583472 104 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 AL590099.1-201ENST00000615276 138 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 AC104307.1-201ENST00000616142 196 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 DNAJC19P6-201ENST00000401853 280 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.46□□□□□ -2.18
CHD7Q9P2D1 AC234781.2-201ENST00000426370 994 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.46□□□□□ -2.18
CHD7Q9P2D1 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CHD7Q9P2D1 AC016727.2-201ENST00000603988 621 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 MIR6788-201ENST00000618842 66 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 AC009452.1-201ENST00000640823 606 ntBASIC1.46□□□□□ -2.18
CHD7Q9P2D1 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CHD7Q9P2D1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CHD7Q9P2D1 UBE2V1P6-201ENST00000430840 422 ntBASIC1.45□□□□□ -2.18
CHD7Q9P2D1 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.45□□□□□ -2.18
CHD7Q9P2D1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.45□□□□□ -2.18
CHD7Q9P2D1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.45□□□□□ -2.18
CHD7Q9P2D1 AC008837.2-201ENST00000513076 418 ntBASIC1.45□□□□□ -2.18
CHD7Q9P2D1 SNORA31.26-201ENST00000517250 137 ntBASIC1.45□□□□□ -2.18
CHD7Q9P2D1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CHD7Q9P2D1 Z85995.1-201ENST00000415547 335 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 AC011979.1-201ENST00000472300 483 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 FABP5P5-201ENST00000515537 406 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 MIR1273G-201ENST00000577677 100 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 AP005137.2-201ENST00000609238 400 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 Y_RNA.68-201ENST00000362881 102 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 DEFB109C-201ENST00000382575 264 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 DEFB109B-201ENST00000382656 264 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 AL359273.1-201ENST00000510918 627 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 AC087854.1-201ENST00000519706 414 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 AC009541.1-201ENST00000438279 2662 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 METTL21EP-201ENST00000298105 713 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 RPL35AP22-201ENST00000436855 335 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 IFNWP4-201ENST00000453148 294 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 PTGES3P5-201ENST00000455109 434 ntBASIC1.44□□□□□ -2.18
CHD7Q9P2D1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.44□□□□□ -2.18
CHD7Q9P2D1 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 Y_RNA.393-201ENST00000383936 102 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 RNU6-516P-201ENST00000411381 104 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AC096992.1-201ENST00000459808 709 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 SNORA31.11-201ENST00000516528 139 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AL121821.2-201ENST00000556081 394 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AC068135.2-201ENST00000569293 1028 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 MIR5000-201ENST00000577717 103 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AC083806.3-201ENST00000614016 455 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 U8.1-201ENST00000362843 134 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 CKS1BP5-201ENST00000434172 273 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AC089999.1-201ENST00000460336 374 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AC243773.3-201ENST00000613270 256 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 uc_338.12-201ENST00000616344 181 ntBASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
CHD7Q9P2D1 U8.9-201ENST00000365667 134 ntBASIC1.42□□□□□ -2.18
CHD7Q9P2D1 RNU1-139P-201ENST00000391307 165 ntBASIC1.42□□□□□ -2.18
CHD7Q9P2D1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.42□□□□□ -2.18
CHD7Q9P2D1 RNA5SP436-201ENST00000516020 115 ntBASIC1.42□□□□□ -2.18
CHD7Q9P2D1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.42□□□□□ -2.18
CHD7Q9P2D1 AP003033.1-201ENST00000527244 415 ntBASIC1.42□□□□□ -2.18
CHD7Q9P2D1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.42□□□□□ -2.18
CHD7Q9P2D1 MAGOH2P-202ENST00000584384 429 ntBASIC1.42□□□□□ -2.18
CHD7Q9P2D1 AC006329.2-201ENST00000611491 394 ntBASIC1.42□□□□□ -2.18
CHD7Q9P2D1 MTND5P10-201ENST00000603719 1809 ntBASIC1.42□□□□□ -2.18
CHD7Q9P2D1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CHD7Q9P2D1 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.42□□□□□ -2.18
CHD7Q9P2D1 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms