Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 Y_RNA.472-201ENST00000384322 102 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 SNORA40.2-201ENST00000390847 128 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 RNU6-882P-201ENST00000391025 103 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 RPL35AP12-201ENST00000425362 338 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AL451062.2-201ENST00000427515 271 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 RNF2P1-201ENST00000442955 1010 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 KLRA1P-201ENST00000503499 986 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 MTCYBP17-201ENST00000503579 789 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 TMEM251P1-201ENST00000503717 318 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC091163.3-201ENST00000518269 1144 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC025881.1-201ENST00000518851 512 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC022080.3-201ENST00000544433 482 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 OR4K8P-201ENST00000578842 1048 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 MIR3609-201ENST00000582661 80 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 BNIP3P24-201ENST00000593398 557 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 BNIP3P27-201ENST00000599991 412 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC024153.1-201ENST00000603103 365 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AP000254.1-201ENST00000609934 520 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC104237.2-201ENST00000612456 443 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 SNHG22-203ENST00000617833 660 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC120349.2-201ENST00000625002 298 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 AC073346.2-201ENST00000624724 2058 ntBASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
EXOSC4Q9NPD3 TAB3P1-202ENST00000452645 1634 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 RNA5SP139-201ENST00000364340 117 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 RNU6-1176P-201ENST00000390955 107 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 DHFRP6-201ENST00000401776 268 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 EEF1A1P41-201ENST00000414667 207 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AL513477.1-202ENST00000417061 214 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AL137014.1-201ENST00000420490 1226 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 MRPS36P1-201ENST00000421291 307 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC007742.1-201ENST00000425789 329 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC092573.2-201ENST00000434546 243 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC112220.1-201ENST00000434628 355 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 ELOCP26-201ENST00000436067 329 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 USP9YP22-201ENST00000438971 294 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 RPS12P2-201ENST00000439728 269 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC112653.1-201ENST00000443851 386 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 RAC1P7-201ENST00000445367 377 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 RFC5P1-201ENST00000454419 874 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 PNPLA4P1-201ENST00000458328 305 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 RPS15AP17-201ENST00000470598 390 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC069528.1-202ENST00000482888 637 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC023424.2-201ENST00000493479 777 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC010625.1-201ENST00000511296 403 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC010374.2-201ENST00000512933 535 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 RNU6-1225P-201ENST00000516336 65 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 CKS1BP7-201ENST00000522230 235 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC128657.1-201ENST00000549459 145 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 YWHAZP1-201ENST00000556286 722 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 MIR4325-201ENST00000583049 90 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 RPL23AP92-201ENST00000603609 255 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AL137843.1-201ENST00000605078 385 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AL137847.3-201ENST00000611521 109 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AL392048.1-201ENST00000613946 534 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC010872.1-201ENST00000624225 675 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC013437.2-201ENST00000639587 677 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 AC009812.4-201ENST00000569134 1805 ntBASIC2.35□□□□□ -2.03
EXOSC4Q9NPD3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AC087359.1-201ENST00000508335 1740 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AL672167.1-206ENST00000356293 943 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 SNORD116-12-201ENST00000384468 92 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 MIR506-201ENST00000384998 124 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AC068533.2-201ENST00000411872 306 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 BX682237.1-201ENST00000415016 335 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AL590233.1-201ENST00000430017 456 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 OFD1P3Y-201ENST00000453312 783 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AC026410.2-201ENST00000460281 156 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AC126182.1-201ENST00000478134 357 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 RPL31P60-201ENST00000478450 367 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AC108734.3-201ENST00000481241 1165 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 COX7A2P2-201ENST00000505291 250 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AC096571.1-202ENST00000506634 735 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 HMGB1P28-201ENST00000507778 552 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 MTCYBP16-201ENST00000509187 1129 ntBASIC2.34□□□□□ -2.03
EXOSC4Q9NPD3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms