Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 AC005832.2-201ENST00000538921 1430 ntBASIC2.93□□□□□ -1.94
TM9SF3Q9HD45 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AL136360.1-201ENST00000503377 1900 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 RNA5SP126-201ENST00000365092 109 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 RNU1-109P-201ENST00000383960 147 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 MIR506-201ENST00000384998 124 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC096533.1-201ENST00000411645 353 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 MTND2P5-201ENST00000432656 1006 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 RPL23AP20-201ENST00000447965 421 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 MTCO3P11-201ENST00000455103 774 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 RNA5SP76-201ENST00000516277 87 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 CYCSP39-201ENST00000565821 309 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC138761.3-201ENST00000579993 334 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 BNIP3P31-201ENST00000604515 566 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC080013.4-201ENST00000607624 649 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AL592148.2-201ENST00000612210 372 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC007318.2-201ENST00000620999 243 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AP002371.2-201ENST00000624450 503 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC126544.2-201ENST00000625174 749 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AC092447.7-201ENST00000422212 1621 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.92□□□□□ -1.94
TM9SF3Q9HD45 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC096644.4-201ENST00000563417 2912 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 MIR767-201ENST00000390228 109 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 RNA5SP274-201ENST00000410484 108 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 RNA5SP184-201ENST00000411071 108 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC092634.2-201ENST00000428146 1010 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 COX6CP2-201ENST00000444980 225 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 MTCYBP11-201ENST00000447254 1109 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 OFD1P3Y-201ENST00000453312 783 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC234775.1-201ENST00000454247 670 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 RN7SL20P-201ENST00000488827 297 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 RPS27P26-201ENST00000494583 239 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC109464.2-201ENST00000510242 943 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC087894.1-201ENST00000538359 518 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 MTCO3P13-201ENST00000577757 781 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AL583856.2-201ENST00000606298 543 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC124016.2-201ENST00000610058 665 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC010872.1-201ENST00000624225 675 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC079597.1-201ENST00000624306 508 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AL138960.2-201ENST00000625145 535 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 OR5H6-203ENST00000642105 978 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 AC012321.1-201ENST00000561622 1588 ntBASIC2.91□□□□□ -1.94
TM9SF3Q9HD45 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TM9SF3Q9HD45 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.9□□□□□ -1.94
TM9SF3Q9HD45 AC062016.1-201ENST00000355719 319 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 Y_RNA.25-201ENST00000362528 102 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 RNU6-1176P-201ENST00000390955 107 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 MTATP6P27-201ENST00000416987 621 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 NUP35P1-201ENST00000422734 947 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 RPL7P37-201ENST00000425095 738 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 DPRXP1-201ENST00000426312 460 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AC087499.2-201ENST00000432861 149 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 RPS20P5-201ENST00000434808 360 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms