Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AL512633.1-201ENST00000399931 655 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 VN1R51P-201ENST00000411675 945 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 NUP35P1-201ENST00000422734 947 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AC019097.1-201ENST00000424783 735 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AADACP1-206ENST00000561502 1193 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 MTCO3P24-201ENST00000572729 782 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 MIR3605-201ENST00000583214 100 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 BNIP3P26-201ENST00000600827 554 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AC008277.2-201ENST00000605196 797 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AL121652.1-201ENST00000608851 448 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 DUXAP10-204ENST00000612052 616 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AC009269.6-201ENST00000621778 588 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 MAPK10-362ENST00000641864 4484 ntBASIC3.11□□□□□ -1.91
VAT1LQ9HCJ6 AL079343.1-201ENST00000572358 1771 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC011460.1-201ENST00000636268 1834 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 DEFB108F-201ENST00000344638 222 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 RNU6-560P-201ENST00000364007 108 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 SNORA1.3-201ENST00000384676 136 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 MIR34A-201ENST00000385130 110 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 MIR9-1-201ENST00000385198 89 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 MIR620-201ENST00000385232 95 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 TPMTP2-201ENST00000414372 726 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 HSPE1P1-201ENST00000421494 318 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 RPL27AP8-201ENST00000424277 446 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 DPPA2P1-201ENST00000428060 556 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC236972.1-201ENST00000433225 199 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 THAP5P1-201ENST00000439089 262 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 TRIM60P18-201ENST00000441518 828 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC007327.1-201ENST00000447461 264 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AL590664.1-201ENST00000448065 339 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 ARPC3P5-201ENST00000448802 534 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 FCF1P6-201ENST00000456841 595 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 snoU109.3-201ENST00000459477 145 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC104164.3-201ENST00000467363 1258 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 RPL30P14-201ENST00000482744 348 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 RN7SL432P-201ENST00000484057 298 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC017037.2-201ENST00000513850 890 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC022483.1-201ENST00000514020 567 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC093677.1-201ENST00000514414 678 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 RNY4P37-201ENST00000516225 96 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC103783.1-201ENST00000520506 373 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC021451.1-201ENST00000523498 1129 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 DEFB108D-201ENST00000527787 222 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC005951.1-201ENST00000576706 485 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AC090615.1-201ENST00000577519 154 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 RPL12P50-201ENST00000603116 116 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.1□□□□□ -1.91
VAT1LQ9HCJ6 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 AC005539.1-201ENST00000443768 1479 ntBASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 MAPK10-322ENST00000641485 4530 ntBASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 Y_RNA.500-201ENST00000384466 111 ntBASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 MIR122-201ENST00000385044 85 ntBASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 MIR181B1-201ENST00000385240 110 ntBASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 RPS3AP24-201ENST00000407896 734 ntBASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 TIMM9P2-201ENST00000419324 266 ntBASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.09□□□□□ -1.91
VAT1LQ9HCJ6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms