Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC092634.6-201ENST00000418558 192 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 RPL21P32-201ENST00000419877 477 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 MTATP6P4-201ENST00000427725 675 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 RPL31P54-201ENST00000429803 370 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 RPL23AP31-201ENST00000456160 467 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 RPS20P24-201ENST00000457473 361 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 snoU109.4-201ENST00000458953 143 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC104472.2-201ENST00000469035 601 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 SRIP1-201ENST00000489235 288 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 KLRA1P-201ENST00000503499 986 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 MTCYBP16-201ENST00000509187 1129 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 SNORA31.1-201ENST00000515993 133 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 SNORA31.5-201ENST00000516190 133 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 RNA5SP148-201ENST00000516527 94 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC087808.1-201ENST00000520501 361 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC027807.1-201ENST00000559921 996 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 SULT1C2P1-202ENST00000562418 459 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AL450336.1-201ENST00000605180 586 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC034229.4-201ENST00000607861 441 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC006329.2-201ENST00000611491 394 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AC009318.4-201ENST00000620496 486 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AP000526.1-201ENST00000603308 1388 ntBASIC2.86□□□□□ -1.95
NXF3Q9H4D5 AL359693.1-201ENST00000614959 2407 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 RNU6-492P-201ENST00000363035 104 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 SNORA14A-201ENST00000364773 135 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 RNA5SP126-201ENST00000365092 109 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 XGY1-201ENST00000381172 446 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 MIR181B1-201ENST00000385240 110 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AL592310.1-201ENST00000414330 671 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC093151.1-201ENST00000427711 313 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC104332.2-201ENST00000429959 156 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 SETP8-201ENST00000435341 628 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC007327.1-201ENST00000447461 264 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 MTND2P19-201ENST00000449129 1012 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC011979.1-201ENST00000472300 483 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC004062.1-201ENST00000509926 645 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 RNA5SP282-201ENST00000516355 108 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 SNORA48.10-201ENST00000516965 160 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC018630.1-201ENST00000541376 925 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 MIR4298-201ENST00000584380 73 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 SNORD39.3-201ENST00000584451 71 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC078899.3-201ENST00000599065 212 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 GAS5-AS1-201ENST00000602767 694 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AC012119.1-201ENST00000603184 222 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 AP003122.6-201ENST00000623831 495 ntBASIC2.85□□□□□ -1.95
NXF3Q9H4D5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
NXF3Q9H4D5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 NACA3P-201ENST00000359690 648 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 SNORD62.1-201ENST00000362541 86 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 SSR1P2-201ENST00000415208 787 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 MTCO2P17-201ENST00000424336 677 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AL035410.1-201ENST00000427409 427 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC084290.1-201ENST00000434995 374 ntBASIC2.84□□□□□ -1.95
NXF3Q9H4D5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.84□□□□□ -1.95
NXF3Q9H4D5 RFC5P1-201ENST00000454419 874 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms