Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 AC011611.1-201ENST00000552179 197 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AL132657.2-201ENST00000564417 358 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 MIR4446-201ENST00000578505 67 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AL645944.1-201ENST00000603857 493 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AC013553.2-201ENST00000604244 589 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AC092574.1-201ENST00000609771 420 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AL445264.1-201ENST00000621719 171 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 AC005832.2-201ENST00000538921 1430 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.31□□□□□ -2.04
SLIRPQ9GZT3 SDAD1P2-201ENST00000441308 2028 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC005336.3-201ENST00000623833 2679 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 RNU6-270P-201ENST00000364131 105 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 Y_RNA.234-201ENST00000364409 97 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 SNORA71.1-201ENST00000364523 117 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 RNU6-343P-201ENST00000364709 104 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 RNU6-198P-201ENST00000384258 104 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 SNORA36C-201ENST00000384289 132 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 RNU6-851P-201ENST00000384565 107 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AL590084.1-201ENST00000407885 387 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 RPS29P4-201ENST00000414733 161 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 SNORD121B-201ENST00000458838 81 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 RPL31P50-201ENST00000471002 296 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 XKRY-201ENST00000510392 1100 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 RAC1P5-201ENST00000512182 576 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC008885.1-201ENST00000514930 301 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC010376.1-201ENST00000522101 334 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC087241.2-201ENST00000535801 324 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC125611.2-201ENST00000551907 647 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 MTND3P13-201ENST00000574391 343 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC020895.1-201ENST00000595362 272 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC068313.1-201ENST00000604028 1008 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC011451.2-201ENST00000604303 598 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC004067.1-201ENST00000608733 700 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AL138478.1-201ENST00000612252 832 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 AC110079.1-202ENST00000635213 138 ntBASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.3□□□□□ -2.04
SLIRPQ9GZT3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL022578.1-201ENST00000439330 1433 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AP000526.1-201ENST00000603308 1388 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 MIR514A1-201ENST00000385133 98 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 RNU6-1000P-201ENST00000391066 106 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 RNU6-952P-201ENST00000391164 108 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 RN7SKP202-201ENST00000410439 330 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AC018630.2-202ENST00000422992 927 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL365496.1-201ENST00000426885 215 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL050321.1-201ENST00000432363 400 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AC011816.1-201ENST00000441346 546 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 CYCSP35-201ENST00000451978 304 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AC097493.1-201ENST00000463958 372 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL135752.1-201ENST00000479477 471 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 RPL21P131-201ENST00000497298 483 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 DSTNP2-201ENST00000504533 515 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 RNA5SP282-201ENST00000516355 108 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 SCARNA15.2-201ENST00000516409 127 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 RNU6-1282P-201ENST00000516735 96 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 SNORA31.21-201ENST00000517180 77 ntBASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.29□□□□□ -2.04
SLIRPQ9GZT3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms