Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RPL21P28-201ENST00000401418 483 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AL592114.1-201ENST00000403842 483 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 Z75741.2-201ENST00000417272 1167 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 HMGN2P30-201ENST00000423237 256 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 COX6CP2-201ENST00000444980 225 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 NANOGNBP1-201ENST00000448444 480 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 TRGVB-201ENST00000453257 471 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 OR6K1P-201ENST00000456766 971 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 RNU6-420P-201ENST00000458780 107 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 RPL21P39-201ENST00000463605 483 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC011979.1-201ENST00000472300 483 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 RPL21P93-201ENST00000480465 489 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC233702.1-201ENST00000482905 502 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC087190.1-201ENST00000484462 480 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC093591.1-201ENST00000491435 481 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 RPL21P16-201ENST00000495531 483 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 XKRY-201ENST00000510392 1100 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC010374.2-201ENST00000512933 535 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 SNORA31.21-201ENST00000517180 77 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 NBEAP1-201ENST00000554452 979 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 VN1R78P-201ENST00000597393 564 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC093732.2-201ENST00000607950 274 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AC004067.1-201ENST00000608733 700 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AL121652.1-201ENST00000608851 448 ntBASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.94□□□□□ -1.94
POLR1EQ9GZS1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 MTND5P19-201ENST00000424872 1794 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 SNORA51.4-201ENST00000364993 124 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 RNA5SP354-201ENST00000391247 136 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 HMGB1P17-201ENST00000403495 628 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AL139281.1-201ENST00000422120 335 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 RPL23AP83-201ENST00000434984 473 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC129850.1-201ENST00000436203 508 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 CYCSP32-201ENST00000440548 321 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 Z96811.1-201ENST00000445880 108 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 RPL21P41-201ENST00000459863 264 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 RNU6-928P-201ENST00000516876 104 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 RNU6-528P-201ENST00000516926 100 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC087373.1-201ENST00000524920 491 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 SETP2-201ENST00000553886 926 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC020895.1-201ENST00000595362 272 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC004987.4-201ENST00000603383 338 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 MIR6130-201ENST00000619419 109 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 Z99129.2-201ENST00000619967 314 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC010338.1-201ENST00000621823 717 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC091953.5-201ENST00000622919 233 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC002064.3-201ENST00000623448 346 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC079597.1-201ENST00000624306 508 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC068880.5-201ENST00000624331 290 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AP001002.2-201ENST00000625137 386 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 MTND4P9-201ENST00000507819 1346 ntBASIC2.93□□□□□ -1.94
POLR1EQ9GZS1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 RNU1-35P-201ENST00000362782 153 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AL512844.2-201ENST00000433990 593 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 RPS20P5-201ENST00000434808 360 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC244505.4-201ENST00000434905 287 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 TAAR7P-201ENST00000436141 242 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 MTCO1P53-201ENST00000441633 699 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 SSXP5-201ENST00000443473 287 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 RPL37P4-201ENST00000448908 268 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 FCF1P6-201ENST00000456841 595 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AP004217.1-201ENST00000480579 346 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC113347.3-201ENST00000509113 148 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 AC093677.1-201ENST00000514414 678 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 SNORA74D-201ENST00000516404 141 ntBASIC2.92□□□□□ -1.94
POLR1EQ9GZS1 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms