Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC117522.3-201ENST00000507974 584 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AC004853.1-201ENST00000604902 698 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 PART1_2.1-201ENST00000612397 250 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AL079343.1-201ENST00000572358 1771 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 FAM35BP-202ENST00000497389 3337 ntBASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CCSER1Q9C0I3 AC011460.1-201ENST00000636268 1834 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC087359.1-201ENST00000508335 1740 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 MIR135A2-201ENST00000384854 100 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 MTCO2P23-201ENST00000425216 680 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AL353691.1-201ENST00000451332 387 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC234775.1-201ENST00000454247 670 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 RPL21P131-201ENST00000497298 483 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 GTF2IP9-201ENST00000502460 301 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 TMEM251P1-201ENST00000503717 318 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC113420.1-201ENST00000507903 571 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 RNU6-583P-201ENST00000516012 92 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 RNU6-415P-201ENST00000516252 97 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 SNORA31.26-201ENST00000517250 137 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC005832.3-201ENST00000537929 631 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 MTCYBP23-201ENST00000558717 1102 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AL157394.1-201ENST00000562983 1224 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 AC109315.1-201ENST00000584143 1347 ntBASIC3.16□□□□□ -1.9
CCSER1Q9C0I3 MIR26A1-201ENST00000362205 77 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 RNU6-28P-201ENST00000362378 107 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 U8.9-201ENST00000365667 134 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 SNORA40.2-201ENST00000390847 128 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AL031679.1-201ENST00000400616 525 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 RPL7P10-201ENST00000417407 739 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AC093151.1-201ENST00000427711 313 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AL590383.1-201ENST00000428602 75 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AL356867.1-201ENST00000429623 299 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 DUXAP8-207ENST00000456786 622 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 FAM172BP-201ENST00000487497 1089 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AP001025.2-201ENST00000490908 477 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 RN7SKP31-201ENST00000516354 278 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 SNORA9.3-201ENST00000516383 129 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 MTND1P8-201ENST00000571424 950 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 MIR3605-201ENST00000583214 100 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 RPP40P2-201ENST00000603596 712 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AL160237.3-201ENST00000604114 1013 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AL033523.1-201ENST00000605153 153 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AC027449.1-201ENST00000608890 407 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 MIR4275-201ENST00000636486 87 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 AC005832.2-201ENST00000538921 1430 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
CCSER1Q9C0I3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 MAPK10-322ENST00000641485 4530 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 SNORA80A-201ENST00000363922 136 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AL592310.1-201ENST00000414330 671 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms