Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNA5SP82-201ENST00000516707 92 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AC105137.2-201ENST00000569073 466 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 NRBF2P1-201ENST00000587407 859 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 U73023.1-201ENST00000603134 700 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AC025588.3-201ENST00000604182 274 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AC106028.5-201ENST00000610332 395 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 MIR7111-201ENST00000619751 72 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AC090617.9-201ENST00000623751 147 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 AC080100.1-201ENST00000624239 5356 ntBASIC2.7□□□□□ -1.98
UPF3BQ9BZI7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AC093536.2-201ENST00000565257 1406 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 RNU6-1074P-201ENST00000383995 104 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 RNU6-40P-201ENST00000384254 107 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AL450338.1-201ENST00000407987 512 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 UBE2V1P11-201ENST00000411559 285 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 RPL7P30-201ENST00000420888 709 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 HSFY3P-201ENST00000444242 1191 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 OR6K5P-201ENST00000447050 945 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 snoU109.4-201ENST00000458953 143 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 NAP1L1P3-201ENST00000462291 880 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 VPS26AP1-201ENST00000483197 979 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 SNORA31.11-201ENST00000516528 139 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AC074051.3-201ENST00000570238 358 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 BNIP3P8-201ENST00000597863 560 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AC021851.1-201ENST00000608537 1082 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AC025263.3-201ENST00000622965 1396 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 Z99496.1-201ENST00000469424 1477 ntBASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
UPF3BQ9BZI7 AC008669.1-201ENST00000565823 2178 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 MTCO1P18-201ENST00000455518 1419 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 AC010680.1-201ENST00000590024 3590 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 Y_RNA.4-201ENST00000362333 112 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 RNU6-252P-201ENST00000363232 107 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 AL589655.1-201ENST00000405398 482 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 MTND3P24-201ENST00000506306 329 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 RN7SKP219-201ENST00000516825 296 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 AC004217.3-201ENST00000551552 878 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 BX322635.1-201ENST00000605804 496 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
UPF3BQ9BZI7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AC006020.1-201ENST00000420179 1854 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 ANAPC10P1-201ENST00000395991 556 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AL136372.1-201ENST00000403060 228 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 ZNF965P-201ENST00000432501 817 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AL359385.1-201ENST00000456509 365 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 RPL30P9-201ENST00000465586 330 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 MTCYBP20-201ENST00000524239 1129 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AP000790.1-201ENST00000528891 737 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AC012414.2-201ENST00000559474 187 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 ACTR3BP3-201ENST00000565577 979 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 HSPE1P7-201ENST00000604681 321 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AL161734.1-201ENST00000609720 557 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AC006329.2-201ENST00000611491 394 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 ZNF663P-202ENST00000641770 1131 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AC130650.2-201ENST00000618736 2403 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 AC008432.1-201ENST00000615912 1320 ntBASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.67□□□□□ -1.98
UPF3BQ9BZI7 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 MTCO1P6-201ENST00000481192 1384 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 HMGB1P11-201ENST00000413899 637 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC092447.6-201ENST00000414578 210 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 PAICSP7-201ENST00000419829 962 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AL137014.1-201ENST00000420490 1226 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC234781.2-201ENST00000426370 994 ntBASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.66□□□□□ -1.98
UPF3BQ9BZI7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms