Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC008121.1-201ENST00000603244 268 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 AL139395.1-201ENST00000603662 160 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 AC114477.1-201ENST00000605097 605 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 SNORD96A-201ENST00000606577 79 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 BX284668.6-201ENST00000606899 438 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 AL161931.1-201ENST00000612768 246 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 MIR1244-1-201ENST00000612829 85 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 RN7SL261P-201ENST00000613441 282 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 AC022467.1-201ENST00000614738 749 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 RN7SL820P-201ENST00000616437 299 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 AC007347.2-201ENST00000623044 180 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 AC091903.1-201ENST00000624322 454 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 AC061999.1-201ENST00000624454 177 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 FKBP1AP4-201ENST00000631775 336 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 MIR1244-3-201ENST00000635744 85 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 MIR1244-2-201ENST00000636449 85 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 MIR1244-4-202ENST00000636813 85 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 ZNF72P-201ENST00000425869 1908 ntBASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC1.59□□□□□ -2.15
LCE3DQ9BYE3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 MTND5P6-201ENST00000422338 1798 ntBASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 OR4G2P-202ENST00000641004 1759 ntBASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 AL136964.1-201ENST00000622038 2990 ntBASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
LCE3DQ9BYE3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RN7SKP95-201ENST00000362860 303 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RNA5SP375-201ENST00000362975 119 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SNORD35A-201ENST00000363389 86 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SNORD115-32-201ENST00000364079 82 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RNU6-806P-201ENST00000365147 105 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RNA5SP223-201ENST00000365174 120 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RNA5SP152-201ENST00000365184 110 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SNORA30B-201ENST00000365319 129 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 SNORA70.6-201ENST00000383934 134 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 Y_RNA.458-201ENST00000384240 102 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 RNU6-166P-201ENST00000384371 107 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 MIR521-1-201ENST00000384902 87 ntBASIC1.58□□□□□ -2.16
LCE3DQ9BYE3 DUTP5-201ENST00000406790 469 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms