Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RAC1P2-201ENST00000511164 579 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.01□□□□□ -1.93
SSX3Q99909 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.01□□□□□ -1.93
SSX3Q99909 RNU6-1129P-201ENST00000515964 104 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 RN7SKP18-201ENST00000516005 275 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 RNU6-928P-201ENST00000516876 104 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 SNORA31.22-201ENST00000517204 135 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 AC068657.1-201ENST00000520807 306 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 MTATP6P15-201ENST00000527233 835 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SSX3Q99909 AC008751.2-201ENST00000597885 980 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 AL353778.1-201ENST00000603149 408 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 AL137849.1-201ENST00000604767 169 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 SNORA62.6-201ENST00000606322 83 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.01□□□□□ -1.93
SSX3Q99909 MIR4275-201ENST00000636486 87 ntBASIC3.01□□□□□ -1.93
SSX3Q99909 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SSX3Q99909 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SSX3Q99909 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SSX3Q99909 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.01□□□□□ -1.93
SSX3Q99909 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.01□□□□□ -1.93
SSX3Q99909 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SSX3Q99909 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSX3Q99909 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SSX3Q99909 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3□□□□□ -1.93
SSX3Q99909 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3□□□□□ -1.93
SSX3Q99909 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSX3Q99909 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SSX3Q99909 RNU6-660P-201ENST00000364566 109 ntBASIC3□□□□□ -1.93
SSX3Q99909 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3□□□□□ -1.93
SSX3Q99909 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3□□□□□ -1.93
SSX3Q99909 AP002088.1-201ENST00000382740 395 ntBASIC3□□□□□ -1.93
SSX3Q99909 RNU6-769P-201ENST00000384407 104 ntBASIC3□□□□□ -1.93
SSX3Q99909 MIR449B-201ENST00000384995 97 ntBASIC3□□□□□ -1.93
SSX3Q99909 MIR325-201ENST00000385260 98 ntBASIC3□□□□□ -1.93
SSX3Q99909 RNA5SP424-201ENST00000390988 115 ntBASIC3□□□□□ -1.93
SSX3Q99909 RNA5SP171-201ENST00000391071 115 ntBASIC3□□□□□ -1.93
SSX3Q99909 AL359704.1-201ENST00000411586 781 ntBASIC3□□□□□ -1.93
SSX3Q99909 RPL23AP39-201ENST00000415533 405 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC234781.2-201ENST00000426370 994 ntBASIC3□□□□□ -1.93
SSX3Q99909 MTCYBP39-201ENST00000437562 491 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3□□□□□ -1.93
SSX3Q99909 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3□□□□□ -1.93
SSX3Q99909 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3□□□□□ -1.93
SSX3Q99909 RPS3AP46-201ENST00000448352 682 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3□□□□□ -1.93
SSX3Q99909 snoU13.28-201ENST00000459235 104 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC010401.1-201ENST00000463867 348 ntBASIC3□□□□□ -1.93
SSX3Q99909 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3□□□□□ -1.93
SSX3Q99909 AC084198.1-201ENST00000477747 402 ntBASIC3□□□□□ -1.93
SSX3Q99909 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3□□□□□ -1.93
SSX3Q99909 AC021678.1-201ENST00000505195 936 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC112198.1-201ENST00000505369 1220 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC110768.1-201ENST00000509222 400 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3□□□□□ -1.93
SSX3Q99909 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3□□□□□ -1.93
SSX3Q99909 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3□□□□□ -1.93
SSX3Q99909 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3□□□□□ -1.93
SSX3Q99909 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3□□□□□ -1.93
SSX3Q99909 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3□□□□□ -1.93
SSX3Q99909 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3□□□□□ -1.93
SSX3Q99909 AL133271.1-201ENST00000538229 291 ntBASIC3□□□□□ -1.93
SSX3Q99909 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3□□□□□ -1.93
SSX3Q99909 AL121766.1-201ENST00000547436 487 ntBASIC3□□□□□ -1.93
SSX3Q99909 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3□□□□□ -1.93
SSX3Q99909 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3□□□□□ -1.93
SSX3Q99909 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3□□□□□ -1.93
SSX3Q99909 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3□□□□□ -1.93
SSX3Q99909 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3□□□□□ -1.93
SSX3Q99909 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3□□□□□ -1.93
SSX3Q99909 AC006960.3-201ENST00000561845 705 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3□□□□□ -1.93
SSX3Q99909 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3□□□□□ -1.93
SSX3Q99909 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3□□□□□ -1.93
SSX3Q99909 MIR4444-1-201ENST00000581696 74 ntBASIC3□□□□□ -1.93
SSX3Q99909 MIR4444-2-201ENST00000584390 74 ntBASIC3□□□□□ -1.93
SSX3Q99909 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
SSX3Q99909 UBE2L4-201ENST00000587688 464 ntBASIC3□□□□□ -1.93
SSX3Q99909 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3□□□□□ -1.93
SSX3Q99909 AL139344.1-201ENST00000605228 195 ntBASIC3□□□□□ -1.93
SSX3Q99909 Z99289.3-201ENST00000605586 594 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC107214.2-201ENST00000608204 634 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC090132.2-201ENST00000615881 347 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC091304.6-201ENST00000619761 202 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3□□□□□ -1.93
SSX3Q99909 MIR6075-201ENST00000620782 95 ntBASIC3□□□□□ -1.93
SSX3Q99909 AL158801.5-201ENST00000623123 465 ntBASIC3□□□□□ -1.93
SSX3Q99909 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3□□□□□ -1.93
SSX3Q99909 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3□□□□□ -1.93
SSX3Q99909 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3□□□□□ -1.93
SSX3Q99909 GABRG2-229ENST00000641017 3628 ntBASIC3□□□□□ -1.93
SSX3Q99909 OR4G2P-202ENST00000641004 1759 ntBASIC3□□□□□ -1.93
SSX3Q99909 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.99□□□□□ -1.93
SSX3Q99909 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSX3Q99909 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSX3Q99909 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SSX3Q99909 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SSX3Q99909 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SSX3Q99909 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms