Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 THAP5P1-201ENST00000439089 262 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 DUXAP8-207ENST00000456786 622 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC083906.5-201ENST00000503722 328 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC021146.8-201ENST00000507455 733 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 RNU6-150P-201ENST00000516237 95 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 SNORA31.26-201ENST00000517250 137 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC239860.2-201ENST00000525886 270 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 NBEAP1-201ENST00000554452 979 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AL132857.1-201ENST00000555180 708 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 MTND1P8-201ENST00000571424 950 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AP001429.1-201ENST00000602568 530 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AC092953.2-201ENST00000608000 699 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AP000254.1-201ENST00000609934 520 ntBASIC3.2□□□□□ -1.9
ZNF560Q96MR9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
ZNF560Q96MR9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 MTCO1P9-201ENST00000505577 1534 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC106754.1-201ENST00000562632 1513 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 RNU6-76P-201ENST00000384060 104 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 RNU6-851P-201ENST00000384565 107 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 RNU6-906P-201ENST00000384700 70 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 MIR23A-201ENST00000385245 73 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 HSPE1P1-201ENST00000421494 318 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC091390.3-201ENST00000426478 338 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 OR2AS1P-201ENST00000427827 319 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC090774.1-201ENST00000435925 246 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 NDUFB4P6-201ENST00000436819 366 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AL009048.1-201ENST00000450437 298 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 UQCRHP3-201ENST00000451503 251 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC104563.1-201ENST00000476147 376 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 RPL30P14-201ENST00000482744 348 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 RPS3AP14-201ENST00000483907 780 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC108729.1-201ENST00000487812 947 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC080014.1-201ENST00000496877 1201 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 AC011260.1-201ENST00000578420 472 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 BNIP3P39-201ENST00000601077 554 ntBASIC3.19□□□□□ -1.9
ZNF560Q96MR9 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.19□□□□□ -1.9
ZNF560Q96MR9 API5P2-201ENST00000397055 1498 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 SNORA14A-201ENST00000364773 135 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 Y_RNA.548-201ENST00000384656 105 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 SNORA46-201ENST00000384762 135 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 USP9YP33-201ENST00000412220 421 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 SDCBPP3-201ENST00000419629 891 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC234781.2-201ENST00000426370 994 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 USP9YP35-201ENST00000435696 412 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 SNRPEP7-201ENST00000438350 220 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 RN7SL633P-201ENST00000488974 297 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 OR5G4P-201ENST00000525251 760 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC007318.2-201ENST00000620999 243 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 OR4G3P-201ENST00000633500 913 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC096644.4-201ENST00000563417 2912 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AC005832.2-201ENST00000538921 1430 ntBASIC3.18□□□□□ -1.9
ZNF560Q96MR9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF560Q96MR9 AP000776.1-201ENST00000530032 1663 ntBASIC3.17□□□□□ -1.9
ZNF560Q96MR9 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms