Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.36□□□□□ -2.19
SPG11Q96JI7 RPL21P2-201ENST00000440049 481 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 AL590664.1-201ENST00000448065 339 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.36□□□□□ -2.19
SPG11Q96JI7 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.36□□□□□ -2.19
SPG11Q96JI7 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.36□□□□□ -2.19
SPG11Q96JI7 AC080078.3-201ENST00000605407 463 ntBASIC1.36□□□□□ -2.19
SPG11Q96JI7 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SPG11Q96JI7 AL358176.2-201ENST00000425769 204 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC027673.1-201ENST00000456245 405 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 SNRPFP3-201ENST00000457792 225 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC069528.1-202ENST00000482888 637 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC022790.1-201ENST00000522872 204 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 MIR4419B-201ENST00000577260 68 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC007229.1-201ENST00000590455 412 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC1.35□□□□□ -2.19
SPG11Q96JI7 KATNBL1P1-201ENST00000605192 748 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC068944.2-201ENST00000610373 403 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 MTCO1P6-201ENST00000481192 1384 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC123912.3-201ENST00000600907 1367 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC091152.2-201ENST00000591628 2569 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SPG11Q96JI7 RNU1-133P-201ENST00000364867 167 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.35□□□□□ -2.19
SPG11Q96JI7 RPS26P24-201ENST00000497656 331 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC090071.1-201ENST00000507713 644 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.35□□□□□ -2.19
SPG11Q96JI7 DUXAP3-201ENST00000603616 594 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 RMST_6.1-201ENST00000611980 203 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.35□□□□□ -2.19
SPG11Q96JI7 AC091895.1-201ENST00000624494 256 ntBASIC1.35□□□□□ -2.19
SPG11Q96JI7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
SPG11Q96JI7 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SPG11Q96JI7 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SPG11Q96JI7 RNU6-60P-201ENST00000364792 103 ntBASIC1.34□□□□□ -2.19
SPG11Q96JI7 MIR520E-201ENST00000384867 87 ntBASIC1.34□□□□□ -2.19
SPG11Q96JI7 MTND4P13-201ENST00000402078 1023 ntBASIC1.34□□□□□ -2.19
SPG11Q96JI7 AC009961.3-201ENST00000449832 765 ntBASIC1.34□□□□□ -2.19
SPG11Q96JI7 AC107032.1-201ENST00000485945 480 ntBASIC1.34□□□□□ -2.19
SPG11Q96JI7 AC103810.1-201ENST00000579873 453 ntBASIC1.34□□□□□ -2.19
SPG11Q96JI7 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.34□□□□□ -2.19
SPG11Q96JI7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.34□□□□□ -2.19
SPG11Q96JI7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.34□□□□□ -2.2
SPG11Q96JI7 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
SPG11Q96JI7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.34□□□□□ -2.2
SPG11Q96JI7 COX6CP12-201ENST00000446748 202 ntBASIC1.34□□□□□ -2.2
SPG11Q96JI7 RPL23AP7-203ENST00000449021 469 ntBASIC1.34□□□□□ -2.2
SPG11Q96JI7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.34□□□□□ -2.2
SPG11Q96JI7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.34□□□□□ -2.2
SPG11Q96JI7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC1.34□□□□□ -2.2
SPG11Q96JI7 AC097468.3-201ENST00000607956 456 ntBASIC1.34□□□□□ -2.2
SPG11Q96JI7 AL138955.1-201ENST00000622881 1040 ntBASIC1.34□□□□□ -2.2
SPG11Q96JI7 AL158801.5-201ENST00000623123 465 ntBASIC1.34□□□□□ -2.2
SPG11Q96JI7 MIR338-201ENST00000636369 67 ntBASIC1.34□□□□□ -2.2
SPG11Q96JI7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
SPG11Q96JI7 AC009487.4-201ENST00000624969 3585 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 RNU4-13P-201ENST00000364019 141 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.33□□□□□ -2.2
SPG11Q96JI7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.33□□□□□ -2.2
SPG11Q96JI7 HMGB1P26-201ENST00000452520 628 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC1.33□□□□□ -2.2
SPG11Q96JI7 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
SPG11Q96JI7 AC105313.1-201ENST00000509121 353 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SPG11Q96JI7 AC034268.2-201ENST00000571784 482 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 RPL23AP78-201ENST00000599928 470 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 AL049779.4-201ENST00000604500 156 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.33□□□□□ -2.2
SPG11Q96JI7 AC034102.8-201ENST00000615146 484 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 AL109933.3-201ENST00000619095 188 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 AC006026.1-201ENST00000444025 1803 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.33□□□□□ -2.2
SPG11Q96JI7 AC002546.1-201ENST00000588041 2504 ntBASIC1.33□□□□□ -2.2
SPG11Q96JI7 CST2P1-201ENST00000425770 87 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 MTCO1P48-201ENST00000448024 1096 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.32□□□□□ -2.2
SPG11Q96JI7 MTND5P4-201ENST00000514978 288 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 Y_RNA.675-201ENST00000516389 149 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 RNU6-405P-201ENST00000516637 110 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 RNU6-467P-201ENST00000517027 110 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.32□□□□□ -2.2
SPG11Q96JI7 AP001029.3-201ENST00000588063 596 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 AC098657.3-201ENST00000620434 263 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC1.32□□□□□ -2.2
SPG11Q96JI7 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC1.32□□□□□ -2.2
SPG11Q96JI7 AP000553.5-201ENST00000641933 54 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
SPG11Q96JI7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.32□□□□□ -2.2
SPG11Q96JI7 RPL7P53-201ENST00000421245 739 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.32□□□□□ -2.2
SPG11Q96JI7 BX510359.4-201ENST00000423750 193 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.32□□□□□ -2.2
SPG11Q96JI7 AC012181.1-201ENST00000479895 423 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 AC109464.2-201ENST00000510242 943 ntBASIC1.32□□□□□ -2.2
SPG11Q96JI7 MTND5P21-201ENST00000531961 522 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms