Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 OR4G2P-201ENST00000328113 903 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 SNORA20.2-201ENST00000383922 131 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 RNU4-55P-201ENST00000410731 137 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-516P-201ENST00000411381 104 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 MTND1P21-201ENST00000412991 285 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 CRYBB2P1-203ENST00000415709 538 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 CCDC58P2-201ENST00000417131 366 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 MTCYBP5-201ENST00000423752 1135 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 RPL21P89-201ENST00000444021 467 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 VN1R17P-201ENST00000472048 1090 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 HMGB1P29-201ENST00000505659 499 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC004062.1-201ENST00000509926 645 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC021146.1-201ENST00000511202 716 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 RNA5SP337-201ENST00000517007 109 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 FAM92A1P1-201ENST00000528023 890 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 YPEL5P3-201ENST00000547227 352 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC007224.1-201ENST00000564410 144 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 MIR3690-201ENST00000580266 75 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC020910.2-201ENST00000603635 610 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC068944.2-201ENST00000610373 403 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC245517.5-201ENST00000611529 162 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AL161637.1-201ENST00000622380 412 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 AC244258.1-201ENST00000637553 1071 ntBASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK5RAP3Q96JB5 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-282P-201ENST00000365357 103 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 RNY3P13-201ENST00000365542 102 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 RNA5SP283-201ENST00000365604 119 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-637P-201ENST00000384050 107 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 Y_RNA.554-201ENST00000384672 102 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 MIR135A2-201ENST00000384854 100 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-328P-201ENST00000390887 106 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-278P-201ENST00000390945 109 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 ELOCP4-201ENST00000420090 333 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC073464.1-201ENST00000429823 534 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 MTND1P12-201ENST00000455231 147 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC108059.3-201ENST00000456388 214 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 RPS3AP14-201ENST00000483907 780 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 RPS3AP50-201ENST00000487064 803 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC007182.2-201ENST00000489251 402 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC011352.1-201ENST00000512300 793 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 RN7SKP289-201ENST00000517244 295 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AP000857.1-201ENST00000532151 543 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 MIR3167-201ENST00000579623 85 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 uc_338.12-201ENST00000616344 181 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC006338.1-201ENST00000618453 749 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC091905.1-201ENST00000624400 311 ntBASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
CDK5RAP3Q96JB5 AF127577.6-201ENST00000623352 2191 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 147.4 ms