Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 AC112200.1-201ENST00000625015 234 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 AL133216.2-202ENST00000634512 349 ntBASIC4.39□□□□□ -1.71
CHFRQ96EP1 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHFRQ96EP1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHFRQ96EP1 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
CHFRQ96EP1 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHFRQ96EP1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHFRQ96EP1 RNU6-223P-201ENST00000362830 107 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RNU6-492P-201ENST00000363035 104 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RNU4-70P-201ENST00000384579 139 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RNU6-1222P-201ENST00000384615 107 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 SNORD116-23-201ENST00000384645 92 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 MIR153-1-201ENST00000384914 90 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 MIR195-201ENST00000385194 87 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RNU6-1106P-201ENST00000390845 107 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RPL21P65-201ENST00000406094 466 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RNU2-3P-201ENST00000410144 191 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 RNU6-261P-201ENST00000459506 102 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RPL7P22-201ENST00000466005 733 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 RPL23AP65-201ENST00000475608 468 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RN7SL132P-201ENST00000478131 296 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 AC010587.1-201ENST00000505809 469 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 HMGB3P15-201ENST00000507326 574 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 AL592156.1-201ENST00000508758 304 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RNA5SP73-201ENST00000516744 108 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 RNU6-1314P-201ENST00000517139 104 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 COPS8P3-201ENST00000526024 482 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 AC063950.1-201ENST00000552036 308 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 MIR3158-1-201ENST00000583596 81 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 POLR3GP2-201ENST00000588366 668 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 DPPA3P3-201ENST00000603842 430 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 AC084781.2-201ENST00000615568 161 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 AC034229.5-201ENST00000624258 185 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 CDRT1-208ENST00000630868 794 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 ELL2P4-201ENST00000446870 1376 ntBASIC4.38□□□□□ -1.71
CHFRQ96EP1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CHFRQ96EP1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHFRQ96EP1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CHFRQ96EP1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CHFRQ96EP1 RNA5SP307-201ENST00000362863 116 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 RNU1-20P-201ENST00000363314 162 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 RNA5SP513-201ENST00000364648 118 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 RNU6-769P-201ENST00000384407 104 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 SNORD96B-201ENST00000386148 79 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 MIR921-201ENST00000401133 56 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 AL592114.1-201ENST00000403842 483 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 RN7SKP167-201ENST00000411047 285 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 MTCO2P27-201ENST00000420740 428 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 BEND7P1-201ENST00000422058 457 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 SRIP2-201ENST00000428470 166 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 RPS15AP9-201ENST00000439856 381 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 TRGVB-201ENST00000453257 471 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC034236.1-201ENST00000469891 373 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 HMGB1P30-201ENST00000492455 606 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 FTH1P21-201ENST00000512179 511 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC034159.1-201ENST00000513885 583 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC105417.1-201ENST00000514691 285 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC026464.5-201ENST00000562497 722 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC007938.3-201ENST00000604965 623 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 AP004247.3-201ENST00000608682 624 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 MIR7151-201ENST00000617477 60 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 uc_338.22-201ENST00000622722 187 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 AC231657.1-201ENST00000624313 397 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.37□□□□□ -1.71
CHFRQ96EP1 NOL8P1-201ENST00000508336 3529 ntBASIC4.37□□□□□ -1.71
CHFRQ96EP1 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms