Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 CACYBPP2-201ENST00000453625 678 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 RPL23AP81-201ENST00000455252 467 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 RPS20P24-201ENST00000457473 361 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
ERCC4Q92889 RN7SL691P-201ENST00000494487 301 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.7□□□□□ -1.66
ERCC4Q92889 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.7□□□□□ -1.66
ERCC4Q92889 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.7□□□□□ -1.66
ERCC4Q92889 RNU6-27P-201ENST00000516146 107 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.7□□□□□ -1.66
ERCC4Q92889 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
ERCC4Q92889 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.7□□□□□ -1.66
ERCC4Q92889 MIR4715-201ENST00000584117 79 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 GLUD1P4-201ENST00000590914 418 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.7□□□□□ -1.66
ERCC4Q92889 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.7□□□□□ -1.66
ERCC4Q92889 Z84480.1-201ENST00000605131 311 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 RNU4-89P-201ENST00000607443 133 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 AC105429.2-201ENST00000610567 517 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 AC112204.3-201ENST00000623822 332 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 MIR4496-201ENST00000635896 61 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ERCC4Q92889 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.7□□□□□ -1.66
ERCC4Q92889 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC4Q92889 AC006020.1-201ENST00000420179 1854 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 MTND4P23-201ENST00000447723 1363 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
ERCC4Q92889 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC4Q92889 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.69□□□□□ -1.66
ERCC4Q92889 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.69□□□□□ -1.66
ERCC4Q92889 OR1S2-201ENST00000302592 978 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 Y_RNA.22-201ENST00000362492 102 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 RNY3P13-201ENST00000365542 102 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC4Q92889 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ERCC4Q92889 RNU6-373P-201ENST00000411247 98 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.69□□□□□ -1.66
ERCC4Q92889 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.69□□□□□ -1.66
ERCC4Q92889 DDX3P2-201ENST00000446138 111 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.69□□□□□ -1.66
ERCC4Q92889 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.69□□□□□ -1.66
ERCC4Q92889 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.69□□□□□ -1.66
ERCC4Q92889 RN7SL98P-201ENST00000462271 300 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 AC109327.1-201ENST00000471666 403 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC4Q92889 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.69□□□□□ -1.66
ERCC4Q92889 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.69□□□□□ -1.66
ERCC4Q92889 RNA5SP49-201ENST00000516450 115 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 IGKV2D-36-201ENST00000518643 226 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.69□□□□□ -1.66
ERCC4Q92889 OR4R1P-201ENST00000529879 463 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC4Q92889 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.69□□□□□ -1.66
ERCC4Q92889 AC063950.1-201ENST00000552036 308 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 SETP7-201ENST00000552169 453 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.69□□□□□ -1.66
ERCC4Q92889 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.69□□□□□ -1.66
ERCC4Q92889 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.69□□□□□ -1.66
ERCC4Q92889 AL590099.1-201ENST00000615276 138 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 AC140479.6-201ENST00000633535 357 ntBASIC4.69□□□□□ -1.66
ERCC4Q92889 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
ERCC4Q92889 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ERCC4Q92889 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
ERCC4Q92889 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ERCC4Q92889 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ERCC4Q92889 EXOC5P1-201ENST00000510543 1969 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
ERCC4Q92889 RNU6-845P-201ENST00000362578 103 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 RNU1-14P-201ENST00000362759 152 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.68□□□□□ -1.66
ERCC4Q92889 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.68□□□□□ -1.66
ERCC4Q92889 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.68□□□□□ -1.66
ERCC4Q92889 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.68□□□□□ -1.66
ERCC4Q92889 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.68□□□□□ -1.66
ERCC4Q92889 snoU109.4-201ENST00000458953 143 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 AC233702.1-201ENST00000482905 502 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 FGF7P4-201ENST00000509595 295 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.68□□□□□ -1.66
ERCC4Q92889 AC017037.2-201ENST00000513850 890 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 RNA5SP401-201ENST00000515920 127 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 SNORD60.2-201ENST00000516883 86 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.68□□□□□ -1.66
ERCC4Q92889 ARL2BPP2-201ENST00000550907 489 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.68□□□□□ -1.66
ERCC4Q92889 MIR4284-201ENST00000578924 81 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.68□□□□□ -1.66
ERCC4Q92889 AC007038.2-201ENST00000608095 740 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.68□□□□□ -1.66
ERCC4Q92889 MFSD8-242ENST00000641690 4199 ntBASIC4.68□□□□□ -1.66
ERCC4Q92889 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.68□□□□□ -1.66
ERCC4Q92889 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.68□□□□□ -1.66
ERCC4Q92889 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
ERCC4Q92889 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.68□□□□□ -1.66
ERCC4Q92889 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.68□□□□□ -1.66
ERCC4Q92889 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ERCC4Q92889 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
ERCC4Q92889 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
ERCC4Q92889 PABPC1P7-201ENST00000413177 1513 ntBASIC4.67□□□□□ -1.66
ERCC4Q92889 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms