Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTF1Q92541 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.86□□□□□ -1.63
RTF1Q92541 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.86□□□□□ -1.63
RTF1Q92541 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
RTF1Q92541 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.86□□□□□ -1.63
RTF1Q92541 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RTF1Q92541 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RTF1Q92541 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTF1Q92541 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTF1Q92541 RNA5SP119-201ENST00000362715 117 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 RNU6-181P-201ENST00000363225 107 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 RNU6-1085P-201ENST00000363576 107 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 MIR7-3-201ENST00000384898 110 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 RNU6-780P-201ENST00000391030 104 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 ATP5A1P2-201ENST00000412323 255 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.85□□□□□ -1.63
RTF1Q92541 RPS29P4-201ENST00000414733 161 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AL109913.1-201ENST00000421173 514 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.85□□□□□ -1.63
RTF1Q92541 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.85□□□□□ -1.63
RTF1Q92541 YME1L1P1-201ENST00000429435 297 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AL121601.2-201ENST00000438019 707 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AC127537.2-201ENST00000439258 465 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AL121877.1-201ENST00000453704 622 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 TRBV12-2-201ENST00000489763 344 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.85□□□□□ -1.63
RTF1Q92541 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.85□□□□□ -1.63
RTF1Q92541 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.85□□□□□ -1.63
RTF1Q92541 Y_RNA.693-201ENST00000516641 110 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 RNU6-445P-201ENST00000516949 107 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC4.85□□□□□ -1.63
RTF1Q92541 IGLVIV-53-201ENST00000520107 367 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.85□□□□□ -1.63
RTF1Q92541 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.85□□□□□ -1.63
RTF1Q92541 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.85□□□□□ -1.63
RTF1Q92541 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.85□□□□□ -1.63
RTF1Q92541 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.85□□□□□ -1.63
RTF1Q92541 AL356432.3-201ENST00000568952 465 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.85□□□□□ -1.63
RTF1Q92541 MIR3118-1-201ENST00000581787 76 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.85□□□□□ -1.63
RTF1Q92541 AC012507.3-201ENST00000603556 477 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AL391646.1-201ENST00000603860 190 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AC025588.3-201ENST00000604182 274 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 OR6R2P-201ENST00000609216 300 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AL355472.4-201ENST00000610233 626 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AL391261.4-201ENST00000616012 481 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 AC119674.1-207ENST00000641355 633 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RTF1Q92541 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTF1Q92541 AC138915.3-201ENST00000562908 1389 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 PNPT1P2-201ENST00000456768 2050 ntBASIC4.85□□□□□ -1.63
RTF1Q92541 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RTF1Q92541 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RTF1Q92541 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.85□□□□□ -1.63
RTF1Q92541 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RTF1Q92541 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.84□□□□□ -1.63
RTF1Q92541 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.84□□□□□ -1.63
RTF1Q92541 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.84□□□□□ -1.63
RTF1Q92541 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RTF1Q92541 RNU6-97P-201ENST00000363387 104 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RTF1Q92541 Y_RNA.481-201ENST00000384373 102 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 U3.20-201ENST00000390909 217 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.84□□□□□ -1.63
RTF1Q92541 HMGB3P20-201ENST00000417997 600 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.84□□□□□ -1.63
RTF1Q92541 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.84□□□□□ -1.63
RTF1Q92541 HMGN2P31-201ENST00000432430 273 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.84□□□□□ -1.63
RTF1Q92541 MTND3P10-201ENST00000450967 341 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.84□□□□□ -1.63
RTF1Q92541 AC091153.1-201ENST00000466297 402 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AC087385.1-201ENST00000475062 312 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AC021382.1-201ENST00000483523 359 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AC023194.1-201ENST00000493084 308 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 SNORD116-26-201ENST00000516006 96 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.84□□□□□ -1.63
RTF1Q92541 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.84□□□□□ -1.63
RTF1Q92541 AL512360.1-201ENST00000555346 234 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AC025678.1-201ENST00000567861 338 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 BNIP3P22-201ENST00000593399 556 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AC055876.5-201ENST00000605667 259 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AC008536.2-201ENST00000607284 349 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RTF1Q92541 AC091953.2-201ENST00000623979 160 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 LRRC77P-213ENST00000637727 880 ntBASIC4.84□□□□□ -1.63
RTF1Q92541 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 MFSD8-236ENST00000641509 4050 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RTF1Q92541 AL592437.2-201ENST00000421655 2434 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.83□□□□□ -1.64
RTF1Q92541 RNU5E-1-201ENST00000362477 120 ntBASIC4.83□□□□□ -1.64
RTF1Q92541 RNA5SP502-201ENST00000362694 119 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms