Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC096577.2-201ENST00000611455 153 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AL158196.1-201ENST00000616786 434 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AC068880.5-201ENST00000624331 290 ntBASIC3.88□□□□□ -1.79
HMGB4Q8WW32 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.88□□□□□ -1.79
HMGB4Q8WW32 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 DDX10P1-201ENST00000448545 1933 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC009812.4-201ENST00000569134 1805 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 OR5J1P-201ENST00000313544 939 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 RNU6-223P-201ENST00000362830 107 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 RNA5SP167-201ENST00000365461 116 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 RNU6-1215P-201ENST00000384441 102 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 MIR34B-201ENST00000385076 84 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 MIR607-201ENST00000385241 96 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 RNU6-278P-201ENST00000390945 109 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 SNORA3C-201ENST00000408792 125 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 RNU2-62P-201ENST00000410868 191 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 Y_RNA.619-201ENST00000410951 90 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 ELOCP17-201ENST00000414751 326 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 RPL31P35-201ENST00000431058 377 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AL358934.1-201ENST00000432346 324 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AL162389.1-201ENST00000449233 177 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 RPS15AP36-201ENST00000492022 382 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 MLLT10P2-201ENST00000506434 249 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC023141.12-201ENST00000512399 199 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC069240.1-201ENST00000548774 375 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 CYP4A43P-201ENST00000568156 121 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC244505.7-201ENST00000599675 272 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 TUG1_2.1-201ENST00000614234 87 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AL603758.1-201ENST00000618654 241 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AC099654.12-201ENST00000639868 649 ntBASIC3.87□□□□□ -1.79
HMGB4Q8WW32 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.87□□□□□ -1.79
HMGB4Q8WW32 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 OR1S2-201ENST00000302592 978 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 XIAPP3-201ENST00000312918 795 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 SNORA31-201ENST00000362607 130 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 Y_RNA.516-201ENST00000384541 124 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 MIR483-201ENST00000385070 76 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AL136372.1-201ENST00000403060 228 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC007283.2-201ENST00000424739 197 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 MTATP6P4-201ENST00000427725 675 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 CYCSP43-201ENST00000438233 310 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC083863.1-201ENST00000438811 231 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC005094.1-201ENST00000440420 368 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 PRDX3P3-201ENST00000447765 522 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AL136380.1-201ENST00000447970 162 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 RPS3AP17-201ENST00000472594 777 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC004924.1-201ENST00000480160 781 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 RPL9P33-201ENST00000484311 566 ntBASIC3.86□□□□□ -1.79
HMGB4Q8WW32 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.86□□□□□ -1.79
HMGB4Q8WW32 AC004062.1-201ENST00000509926 645 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms